BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000072.1_g0560.1
(476 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 98 2e-21
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 98 2e-21
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 72 4e-14
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 98.2 bits (243), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 117/258 (45%), Gaps = 40/258 (15%)
Query: 4 IHRLKDQLKGELEMKDLGASRKILGMEIRRDRSARKLVLSHKTYIEKVLERFGMTEAKLV 63
+ LK QLK +++DLG + LG+EI R SA + + + Y +L+ G+ K
Sbjct: 297 VDELKSQLKSCFKLRDLGPLKYFLGLEIAR--SAAGINICQRKYALDLLDETGLLGCKPS 354
Query: 64 GTPLAAHFKLSGELSPTTDDETEYMSRVPFANAVGSIMYAMVCTRPDISHVVSVVSRYMG 123
P+ S +++ + +G +MY + TR DIS V+ +S++
Sbjct: 355 SVPMDPSVTFSAH------SGGDFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSE 407
Query: 124 RPGRGHWQAVKWILWYLGGTAELGLVYDRRA----------------DTSGSLDSSAAVG 167
P H QAV IL Y+ GT GL Y +A DT S +
Sbjct: 408 APRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFL 467
Query: 168 GSAVYN--------------ESEYMAATEAVKEAIWQSGLVRDLGLK-QEVTKVYCDNQS 212
G+++ + E+EY A + A E +W + R+L L + T ++CDN +
Sbjct: 468 GTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTA 527
Query: 213 AIQLSKNQMYHERIKHID 230
AI ++ N ++HER KHI+
Sbjct: 528 AIHIATNAVFHERTKHIE 545
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 98.2 bits (243), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 117/258 (45%), Gaps = 40/258 (15%)
Query: 4 IHRLKDQLKGELEMKDLGASRKILGMEIRRDRSARKLVLSHKTYIEKVLERFGMTEAKLV 63
+ LK QLK +++DLG + LG+EI R SA + + + Y +L+ G+ K
Sbjct: 297 VDELKSQLKSCFKLRDLGPLKYFLGLEIAR--SAAGINICQRKYALDLLDETGLLGCKPS 354
Query: 64 GTPLAAHFKLSGELSPTTDDETEYMSRVPFANAVGSIMYAMVCTRPDISHVVSVVSRYMG 123
P+ S +++ + +G +MY + TR DIS V+ +S++
Sbjct: 355 SVPMDPSVTFSAH------SGGDFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSE 407
Query: 124 RPGRGHWQAVKWILWYLGGTAELGLVYDRRA----------------DTSGSLDSSAAVG 167
P H QAV IL Y+ GT GL Y +A DT S +
Sbjct: 408 APRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFL 467
Query: 168 GSAVYN--------------ESEYMAATEAVKEAIWQSGLVRDLGLK-QEVTKVYCDNQS 212
G+++ + E+EY A + A E +W + R+L L + T ++CDN +
Sbjct: 468 GTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTA 527
Query: 213 AIQLSKNQMYHERIKHID 230
AI ++ N ++HER KHI+
Sbjct: 528 AIHIATNAVFHERTKHIE 545
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 72.4 bits (176), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 73/145 (50%), Gaps = 10/145 (6%)
Query: 4 IHRLKDQLKGELEMKDLGASRKILGMEIRRDRSARKLVLSHKTYIEKVLERFGMTEAKLV 63
++ L QL MKDLG LG++I+ S L LS Y E++L GM + K +
Sbjct: 20 LNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQTKYAEQILNNAGMLDCKPM 77
Query: 64 GTPLAAHFKLSGELSPTTDDETEYMSRVPFANAVGSIMYAMVCTRPDISHVVSVVSRYMG 123
TPL KL+ +S +Y F + VG++ Y + TRPDIS+ V++V + M
Sbjct: 78 STPLP--LKLNSSVS-----TAKYPDPSDFRSIVGALQY-LTLTRPDISYAVNIVCQRMH 129
Query: 124 RPGRGHWQAVKWILWYLGGTAELGL 148
P + +K +L Y+ GT GL
Sbjct: 130 EPTLADFDLLKRVLRYVKGTIFHGL 154