BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000072.1_g0670.1
(252 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 139 2e-37
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 139 2e-37
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 87 4e-21
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 139 bits (351), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 64/143 (44%), Positives = 91/143 (63%), Gaps = 3/143 (2%)
Query: 55 VLLLEDNEPSIYNQAMTSPDFKKLLKAMRSEMDSMSENQVWDLIDLPDGPKPIGCKWVFK 114
V + + EPS YN+A +F AM E+ +M W++ LP KPIGCKWV+K
Sbjct: 78 VCIAKAKEPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYK 134
Query: 115 VKTDKDGNISVFKARLVAKGYKQIYGIDYAETFSPVAMHKSIRIILAVAAHYDYEIWQID 174
+K + DG I +KARLVAKGY Q GID+ ETFSPV S+++ILA++A Y++ + Q+D
Sbjct: 135 IKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLD 194
Query: 175 VKTAFLKRHLEEDVYMTQPEGFV 197
+ AFL L+E++YM P G+
Sbjct: 195 ISNAFLNGDLDEEIYMKLPPGYA 217
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 139 bits (351), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 64/143 (44%), Positives = 91/143 (63%), Gaps = 3/143 (2%)
Query: 55 VLLLEDNEPSIYNQAMTSPDFKKLLKAMRSEMDSMSENQVWDLIDLPDGPKPIGCKWVFK 114
V + + EPS YN+A +F AM E+ +M W++ LP KPIGCKWV+K
Sbjct: 78 VCIAKAKEPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYK 134
Query: 115 VKTDKDGNISVFKARLVAKGYKQIYGIDYAETFSPVAMHKSIRIILAVAAHYDYEIWQID 174
+K + DG I +KARLVAKGY Q GID+ ETFSPV S+++ILA++A Y++ + Q+D
Sbjct: 135 IKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLD 194
Query: 175 VKTAFLKRHLEEDVYMTQPEGFV 197
+ AFL L+E++YM P G+
Sbjct: 195 ISNAFLNGDLDEEIYMKLPPGYA 217
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 87.4 bits (215), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 62 EPSIYNQAMTSPDFKKLLKAMRSEMDSMSENQVWDLIDLPDGPKPIGCKWVFKVKTDKDG 121
EP A+ P + +AM+ E+D++S N+ W L+ P +GCKWVFK K DG
Sbjct: 27 EPKSVIFALKDPGW---CQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDG 83
Query: 122 NISVFKARLVAKGYKQIYGIDYAETFSPVAMHKSIRIILAVA 163
+ KARLVAKG+ Q GI + ET+SPV +IR IL VA
Sbjct: 84 TLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125