BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000072.1_g0750.1
(439 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 342 e-108
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 342 e-108
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 245 5e-79
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 86 3e-20
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 342 bits (877), Expect = e-108, Method: Compositional matrix adjust.
Identities = 181/437 (41%), Positives = 270/437 (61%), Gaps = 9/437 (2%)
Query: 1 LDYSETFSPVVKSSTIRAVLTIAVTNHWHIKQLDVSNSFLHGVLDEDVFMTQPTGFV--- 57
+D+ ETFSPV K ++++ +L I+ ++ + QLD+SN+FL+G LDE+++M P G+
Sbjct: 161 IDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQ 220
Query: 58 -DSSKKDWVCHLHKSLYGLKQAPRAWYTKFASFLLDFGFQKSATDHSMFVYQAQGDTLVL 116
DS + VC+L KS+YGLKQA R W+ KF+ L+ FGF +S +DH+ F+ L +
Sbjct: 221 GDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCV 280
Query: 117 LLYVDDIILTGSSTDLLHSLVLSLQEAFAMKDLGSLHYFLGIEVSSLPSSSGLLLTQNKY 176
L+YVDDII+ ++ + L L+ F ++DLG L YFLG+E++ S++G+ + Q KY
Sbjct: 281 LVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIAR--SAAGINICQRKY 338
Query: 177 TLELLQKAELFDSKPMATPIPFGKRLSKDDGILLEDPTHYRSLVGGLQYLTMTRPDIAFG 236
L+LL + L KP + P+ S G D YR L+G L YL +TR DI+F
Sbjct: 339 ALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFA 398
Query: 237 VNYVAQVMQAPRDVHLQMVKRIFRYLKGSLGSGISIKPGDYTSLTAYSDSDWAGCPDSRR 296
VN ++Q +APR H Q V +I Y+KG++G G+ L +SD+ + C D+RR
Sbjct: 399 VNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRR 458
Query: 297 STCGFCVFLGSTLVAWCSKKQPTVARSSTEAEYKALALASSELLWLSYVLTELGVNVHTP 356
ST G+C+FLG++L++W SKKQ V++SS EAEY+AL+ A+ E++WL+ EL + + P
Sbjct: 459 STNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKP 518
Query: 357 YVLKCDNLGAQHLATNPVFHARTKHVEIDYHFVREL-VASGTLRLDYVSSQNQLADVFTK 415
+L CDN A H+ATN VFH RTKH+E D H VRE V TL + + Q D FT+
Sbjct: 519 TLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYDEQ--DGFTE 576
Query: 416 GLSNPLFLSLLSNLMMF 432
LS L +++ + MF
Sbjct: 577 YLSPILRGTIMYIVSMF 593
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 342 bits (877), Expect = e-108, Method: Compositional matrix adjust.
Identities = 181/437 (41%), Positives = 270/437 (61%), Gaps = 9/437 (2%)
Query: 1 LDYSETFSPVVKSSTIRAVLTIAVTNHWHIKQLDVSNSFLHGVLDEDVFMTQPTGFV--- 57
+D+ ETFSPV K ++++ +L I+ ++ + QLD+SN+FL+G LDE+++M P G+
Sbjct: 161 IDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQ 220
Query: 58 -DSSKKDWVCHLHKSLYGLKQAPRAWYTKFASFLLDFGFQKSATDHSMFVYQAQGDTLVL 116
DS + VC+L KS+YGLKQA R W+ KF+ L+ FGF +S +DH+ F+ L +
Sbjct: 221 GDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCV 280
Query: 117 LLYVDDIILTGSSTDLLHSLVLSLQEAFAMKDLGSLHYFLGIEVSSLPSSSGLLLTQNKY 176
L+YVDDII+ ++ + L L+ F ++DLG L YFLG+E++ S++G+ + Q KY
Sbjct: 281 LVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIAR--SAAGINICQRKY 338
Query: 177 TLELLQKAELFDSKPMATPIPFGKRLSKDDGILLEDPTHYRSLVGGLQYLTMTRPDIAFG 236
L+LL + L KP + P+ S G D YR L+G L YL +TR DI+F
Sbjct: 339 ALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFA 398
Query: 237 VNYVAQVMQAPRDVHLQMVKRIFRYLKGSLGSGISIKPGDYTSLTAYSDSDWAGCPDSRR 296
VN ++Q +APR H Q V +I Y+KG++G G+ L +SD+ + C D+RR
Sbjct: 399 VNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRR 458
Query: 297 STCGFCVFLGSTLVAWCSKKQPTVARSSTEAEYKALALASSELLWLSYVLTELGVNVHTP 356
ST G+C+FLG++L++W SKKQ V++SS EAEY+AL+ A+ E++WL+ EL + + P
Sbjct: 459 STNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKP 518
Query: 357 YVLKCDNLGAQHLATNPVFHARTKHVEIDYHFVREL-VASGTLRLDYVSSQNQLADVFTK 415
+L CDN A H+ATN VFH RTKH+E D H VRE V TL + + Q D FT+
Sbjct: 519 TLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYDEQ--DGFTE 576
Query: 416 GLSNPLFLSLLSNLMMF 432
LS L +++ + MF
Sbjct: 577 YLSPILRGTIMYIVSMF 593
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 245 bits (625), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 117/230 (50%), Positives = 158/230 (68%), Gaps = 3/230 (1%)
Query: 114 LVLLLYVDDIILTGSSTDLLHSLVLSLQEAFAMKDLGSLHYFLGIEVSSLPSSSGLLLTQ 173
+ LLLYVDDI+LTGSS LL+ L+ L F+MKDLG +HYFLGI++ + PS GL L+Q
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPS--GLFLSQ 58
Query: 174 NKYTLELLQKAELFDSKPMATPIPFGKRLSKDDGILLEDPTHYRSLVGGLQYLTMTRPDI 233
KY ++L A + D KPM+TP+P K S DP+ +RS+VG LQYLT+TRPDI
Sbjct: 59 TKYAEQILNNAGMLDCKPMSTPLPL-KLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDI 117
Query: 234 AFGVNYVAQVMQAPRDVHLQMVKRIFRYLKGSLGSGISIKPGDYTSLTAYSDSDWAGCPD 293
++ VN V Q M P ++KR+ RY+KG++ G+ I ++ A+ DSDWAGC
Sbjct: 118 SYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTS 177
Query: 294 SRRSTCGFCVFLGSTLVAWCSKKQPTVARSSTEAEYKALALASSELLWLS 343
+RRST GFC FLG +++W +K+QPTV+RSSTE EY+ALAL ++EL W S
Sbjct: 178 TRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTWSS 227
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 85.9 bits (211), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 50/78 (64%)
Query: 225 YLTMTRPDIAFGVNYVAQVMQAPRDVHLQMVKRIFRYLKGSLGSGISIKPGDYTSLTAYS 284
YLT+TRPD+ F VN ++Q A R +Q V ++ Y+KG++G G+ L A++
Sbjct: 2 YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61
Query: 285 DSDWAGCPDSRRSTCGFC 302
DSDWA CPD+RRS GFC
Sbjct: 62 DSDWASCPDTRRSVTGFC 79