BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000072.1_g0760.1
(219 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1... 74 7e-15
AT1G40390.1 | DNAse I-like superfamily protein | Chr1:15432576-1... 59 6e-10
>AT1G43760.1 | DNAse I-like superfamily protein |
Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
Length = 626
Score = 73.6 bits (179), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 13/212 (6%)
Query: 3 LIDIGYQGNPYTWSNRQFAGNLIQERLDRALANDQWLQNFPGSCLTHLDTIGSDHNPIFL 62
L+DI +G YTWSN Q N I +LDRA+AN W +FP + + SDH+P +
Sbjct: 261 LVDIPSRGVHYTWSNHQ-DDNPIIRKLDRAIANGDWFSSFPSAIAVFELSGVSDHSPCII 319
Query: 63 KTCDQSHPSPKPFKFIRTWMTHPDCHEFIARNWAHS-HYSNYSNNIQHRLKALSKNLTQW 121
+ S K F++ THP + W ++ ++ LKA K
Sbjct: 320 ILENLPKRSKKCFRYFSFLSTHPTFLVSLTVAWEEQIPVGSHMFSLGEHLKAAKKCCKLL 379
Query: 122 NKNVFGNIEKQITNIISNIQKNQNK--TEILALQARLEELYRQQ--------ESMWKEKS 171
N+ FGNI+ + + +++ Q++ T R+E + R++ ES +++KS
Sbjct: 380 NRQGFGNIQHKTKEALDSLESIQSQLLTNPSDSLFRVEHVARKKWNFFAAALESFYRQKS 439
Query: 172 RNDFITLGDKDTIYFHSQAIQ-RNRNIAMHLR 202
R ++ GD +T +FH + + +N+ LR
Sbjct: 440 RIKWLQDGDANTRFFHKVILANQAKNLIKFLR 471
>AT1G40390.1 | DNAse I-like superfamily protein |
Chr1:15432576-15434674 REVERSE LENGTH=426 | 201606
Length = 426
Score = 58.5 bits (140), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 82/193 (42%), Gaps = 25/193 (12%)
Query: 3 LIDIGYQGNPYTWSNRQFAGNLIQERLDRALANDQWLQNFPGSCLTHLDTIGSDHNPIFL 62
L+D+ +G YTWSN Q N I +LDRA+ N WL FP + SDH +
Sbjct: 162 LVDLPCRGVLYTWSNHQ-QDNPILRKLDRAIVNGCWLATFPTASAIFDPPSDSDHAACMV 220
Query: 63 KTCDQSHP--SPKPFKFIRTWMTHPDCHEFIARNWAHS-HYSNYSNNIQHRLKALSKNLT 119
+ S P K FK+ THPD I W ++ ++ LK K
Sbjct: 221 -ILNNSPPLSKKKSFKYFSFLSTHPDFISSILAAWQKEIAVGSFMFSLGELLKEAKKACR 279
Query: 120 QWNKNVFGNIEKQITNIISNIQKNQNKTEILALQARLEELYRQQ--------ESMWKEKS 171
N+ F NI+ Q+ + N ++ L R E + R+ ES +K+KS
Sbjct: 280 GLNRRGFSNIQAQLMS---------NPSDFL---FRAEHVARKNWNFFAAALESFYKQKS 327
Query: 172 RNDFITLGDKDTI 184
R ++ GD + +
Sbjct: 328 RIKWLKEGDLELL 340