BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000076.1_g0030.1
(362 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 246 2e-73
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 246 2e-73
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 184 2e-56
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 68 5e-14
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 246 bits (628), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 146/378 (38%), Positives = 203/378 (53%), Gaps = 46/378 (12%)
Query: 1 MHQPPGFV----DSAFPDHVCKLNKALYGLKQAPRAWFNHFTTYITELGFVASRSDSSLF 56
M PPG+ DS P+ VC L K++YGLKQA R WF F+ + GFV S SD + F
Sbjct: 210 MKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYF 269
Query: 57 IYQTSNSITILLLYVDYILITGSDDIVISQIVSSLHCQFSMTDLGDLHYFLGMEISRSPE 116
+ T+ +L+YVD I+I ++D + ++ S L F + DLG L YFLG+EI+RS
Sbjct: 270 LKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAA 329
Query: 117 GLLITQNRYTTDILSRIDL--PKPVSTPSP----------------------CGKKMS-- 150
G+ I Q +Y D+L L KP S P G+ M
Sbjct: 330 GINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQ 389
Query: 151 ------SLDVNQVCQHMHSPTVIHFGAVKRILRYLKGTLGHGIFFSTSSESHAKGFDAQL 204
S VN++ Q +P + H AV +IL Y+KGT+G G+F+S+ +E QL
Sbjct: 390 ITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAE-------MQL 442
Query: 205 TAFTDADWAGDPDTRRSISGNCIFLGNHPISWTSKKQPTVARSSTEAEYRALAITIAELA 264
F+DA + DTRRS +G C+FLG ISW SKKQ V++SS EAEYRAL+ E+
Sbjct: 443 QVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMM 502
Query: 265 WIQHLLCDLGISMTKTPQLHCDNISATYMAHNPILHSRTKHMELDYHFVRER-VQRKALQ 323
W+ +L + ++K L CDN +A ++A N + H RTKH+E D H VRER V + L
Sbjct: 503 WLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLS 562
Query: 324 VSYVPTHQQLADIFTKGL 341
S+ +Q D FT+ L
Sbjct: 563 YSFQAYDEQ--DGFTEYL 578
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 246 bits (628), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 146/378 (38%), Positives = 203/378 (53%), Gaps = 46/378 (12%)
Query: 1 MHQPPGFV----DSAFPDHVCKLNKALYGLKQAPRAWFNHFTTYITELGFVASRSDSSLF 56
M PPG+ DS P+ VC L K++YGLKQA R WF F+ + GFV S SD + F
Sbjct: 210 MKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYF 269
Query: 57 IYQTSNSITILLLYVDYILITGSDDIVISQIVSSLHCQFSMTDLGDLHYFLGMEISRSPE 116
+ T+ +L+YVD I+I ++D + ++ S L F + DLG L YFLG+EI+RS
Sbjct: 270 LKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAA 329
Query: 117 GLLITQNRYTTDILSRIDL--PKPVSTPSP----------------------CGKKMS-- 150
G+ I Q +Y D+L L KP S P G+ M
Sbjct: 330 GINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQ 389
Query: 151 ------SLDVNQVCQHMHSPTVIHFGAVKRILRYLKGTLGHGIFFSTSSESHAKGFDAQL 204
S VN++ Q +P + H AV +IL Y+KGT+G G+F+S+ +E QL
Sbjct: 390 ITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAE-------MQL 442
Query: 205 TAFTDADWAGDPDTRRSISGNCIFLGNHPISWTSKKQPTVARSSTEAEYRALAITIAELA 264
F+DA + DTRRS +G C+FLG ISW SKKQ V++SS EAEYRAL+ E+
Sbjct: 443 QVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMM 502
Query: 265 WIQHLLCDLGISMTKTPQLHCDNISATYMAHNPILHSRTKHMELDYHFVRER-VQRKALQ 323
W+ +L + ++K L CDN +A ++A N + H RTKH+E D H VRER V + L
Sbjct: 503 WLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLS 562
Query: 324 VSYVPTHQQLADIFTKGL 341
S+ +Q D FT+ L
Sbjct: 563 YSFQAYDEQ--DGFTEYL 578
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 184 bits (468), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 100/230 (43%), Positives = 135/230 (58%), Gaps = 38/230 (16%)
Query: 67 LLLYVDYILITGSDDIVISQIVSSLHCQFSMTDLGDLHYFLGMEISRSPEGLLITQNRYT 126
LLLYVD IL+TGS + +++ ++ L FSM DLG +HYFLG++I P GL ++Q +Y
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62
Query: 127 TDILSRIDL--PKPVSTPSPCGKKMS-----------------------------SLDVN 155
IL+ + KP+STP P S S VN
Sbjct: 63 EQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVN 122
Query: 156 QVCQHMHSPTVIHFGAVKRILRYLKGTLGHGIFFSTSSESHAKGFDAQLTAFTDADWAGD 215
VCQ MH PT+ F +KR+LRY+KGT+ HG++ +S+ + + AF D+DWAG
Sbjct: 123 IVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQ-------AFCDSDWAGC 175
Query: 216 PDTRRSISGNCIFLGNHPISWTSKKQPTVARSSTEAEYRALAITIAELAW 265
TRRS +G C FLG + ISW++K+QPTV+RSSTE EYRALA+T AEL W
Sbjct: 176 TSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 68.2 bits (165), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 7/73 (9%)
Query: 154 VNQVCQHMHSPTVIHFGAVKRILRYLKGTLGHGIFFSTSSESHAKGFDAQLTAFTDADWA 213
VN++ Q + AV ++L Y+KGT+G G+F+S +S D QL AF D+DWA
Sbjct: 14 VNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATS-------DLQLKAFADSDWA 66
Query: 214 GDPDTRRSISGNC 226
PDTRRS++G C
Sbjct: 67 SCPDTRRSVTGFC 79