BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000076.1_g0120.1
(98 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G24020.2 | NIN like protein 7 | Chr4:12481200-12483822 FORWAR... 143 3e-41
AT4G24020.1 | NIN like protein 7 | Chr4:12479904-12483822 FORWAR... 143 4e-41
AT1G64530.1 | Plant regulator RWP-RK family protein | Chr1:23959... 105 1e-27
AT1G64530.2 | Plant regulator RWP-RK family protein | Chr1:23960... 103 5e-27
AT2G43500.2 | Plant regulator RWP-RK family protein | Chr2:18062... 99 1e-25
>AT4G24020.2 | NIN like protein 7 | Chr4:12481200-12483822 FORWARD
LENGTH=679 | 201606
Length = 679
Score = 143 bits (361), Expect = 3e-41, Method: Composition-based stats.
Identities = 64/98 (65%), Positives = 81/98 (82%)
Query: 1 MRNMTIKVAYRDDIIRFRLLLTSGMTELMEEVAKRLKLEVGTFIIKYLDDNQEWVVLSCD 60
MR +TIK +Y+DDIIRFR+ SG+ EL +EVAKRLK++ GTF IKYLDD+ EWV+++CD
Sbjct: 581 MRTVTIKASYKDDIIRFRISSGSGIMELKDEVAKRLKVDAGTFDIKYLDDDNEWVLIACD 640
Query: 61 SDLQECMQIARLSGRHLIRLLVHDVLANLGSSCESTGE 98
+DLQEC++I R S ++RLLVHDV NLGSSCESTGE
Sbjct: 641 ADLQECLEIPRSSRTKIVRLLVHDVTTNLGSSCESTGE 678
>AT4G24020.1 | NIN like protein 7 | Chr4:12479904-12483822 FORWARD
LENGTH=959 | 201606
Length = 959
Score = 143 bits (361), Expect = 4e-41, Method: Composition-based stats.
Identities = 64/98 (65%), Positives = 81/98 (82%)
Query: 1 MRNMTIKVAYRDDIIRFRLLLTSGMTELMEEVAKRLKLEVGTFIIKYLDDNQEWVVLSCD 60
MR +TIK +Y+DDIIRFR+ SG+ EL +EVAKRLK++ GTF IKYLDD+ EWV+++CD
Sbjct: 861 MRTVTIKASYKDDIIRFRISSGSGIMELKDEVAKRLKVDAGTFDIKYLDDDNEWVLIACD 920
Query: 61 SDLQECMQIARLSGRHLIRLLVHDVLANLGSSCESTGE 98
+DLQEC++I R S ++RLLVHDV NLGSSCESTGE
Sbjct: 921 ADLQECLEIPRSSRTKIVRLLVHDVTTNLGSSCESTGE 958
>AT1G64530.1 | Plant regulator RWP-RK family protein |
Chr1:23959820-23962896 FORWARD LENGTH=841 | 201606
Length = 841
Score = 105 bits (261), Expect = 1e-27, Method: Composition-based stats.
Identities = 52/96 (54%), Positives = 68/96 (70%), Gaps = 2/96 (2%)
Query: 4 MTIKVAYRDDIIRFRLLLTS-GMTELMEEVAKRLKLEVGTFIIKYLDDNQEWVVLSCDSD 62
++IK YR+DIIRF++ S +TEL ++VAKRLKLE F +KYLDD++EWV +SCD+D
Sbjct: 742 VSIKATYREDIIRFKISPESVSITELKQQVAKRLKLETAAFELKYLDDDREWVSVSCDAD 801
Query: 63 LQECMQIARLSGRHLIRLLVHDVLANLGSSCESTGE 98
L EC+ + L RL VHDV N GSSCES+ E
Sbjct: 802 LSECLDTSAAKANTL-RLSVHDVTFNFGSSCESSEE 836
>AT1G64530.2 | Plant regulator RWP-RK family protein |
Chr1:23960350-23962896 FORWARD LENGTH=686 | 201606
Length = 686
Score = 103 bits (256), Expect = 5e-27, Method: Composition-based stats.
Identities = 52/96 (54%), Positives = 68/96 (70%), Gaps = 2/96 (2%)
Query: 4 MTIKVAYRDDIIRFRLLLTS-GMTELMEEVAKRLKLEVGTFIIKYLDDNQEWVVLSCDSD 62
++IK YR+DIIRF++ S +TEL ++VAKRLKLE F +KYLDD++EWV +SCD+D
Sbjct: 587 VSIKATYREDIIRFKISPESVSITELKQQVAKRLKLETAAFELKYLDDDREWVSVSCDAD 646
Query: 63 LQECMQIARLSGRHLIRLLVHDVLANLGSSCESTGE 98
L EC+ + L RL VHDV N GSSCES+ E
Sbjct: 647 LSECLDTSAAKANTL-RLSVHDVTFNFGSSCESSEE 681
>AT2G43500.2 | Plant regulator RWP-RK family protein |
Chr2:18062715-18066450 FORWARD LENGTH=947 | 201606
Length = 947
Score = 99.4 bits (246), Expect = 1e-25, Method: Composition-based stats.
Identities = 45/94 (47%), Positives = 65/94 (69%)
Query: 4 MTIKVAYRDDIIRFRLLLTSGMTELMEEVAKRLKLEVGTFIIKYLDDNQEWVVLSCDSDL 63
+ +K +YR+D +RF+ + G +L +EV KR KL+ G+F +KYLDD +EWV+L DSDL
Sbjct: 848 LIVKASYREDTVRFKFEPSVGCPQLYKEVGKRFKLQDGSFQLKYLDDEEEWVMLVTDSDL 907
Query: 64 QECMQIARLSGRHLIRLLVHDVLANLGSSCESTG 97
QEC++I G+H ++ LV D+ A LGSS S G
Sbjct: 908 QECLEILHGMGKHSVKFLVRDLSAPLGSSGGSNG 941