BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000076.1_g0140.1
(1465 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 565 e-180
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 565 e-180
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 212 6e-62
AT1G21280.1 | Copia-like polyprotein/retrotransposon | Chr1:7447... 120 6e-30
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 103 8e-25
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 565 bits (1456), Expect = e-180, Method: Compositional matrix adjust.
Identities = 275/570 (48%), Positives = 382/570 (67%), Gaps = 12/570 (2%)
Query: 901 RLRRPPSRLNDYICNALPSTTSHDMVSYPLTDYISFDSFSDHHKNFLASVLSNTEPRNYS 960
R R P+ L DY C+++ S T HD ++ ++S++ S + +FL + EP Y+
Sbjct: 36 RRTRKPAYLQDYYCHSVASLTIHD-----ISQFLSYEKVSPLYHSFLVCIAKAKEPSTYN 90
Query: 961 QAMTSSHWREAMAKEISALESNKTWSLVDLPPGKRPIGCKWVYKIKHRSDGSIERYKARL 1020
+A W AM EI A+E+ TW + LPP K+PIGCKWVYKIK+ SDG+IERYKARL
Sbjct: 91 EAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARL 150
Query: 1021 VAKGYTQIEGLDYTDTFAPVAKLVTIRALLSIASIQGWTLHQLDVNNAFLQGDREEEVYM 1080
VAKGYTQ EG+D+ +TF+PV KL +++ +L+I++I +TLHQLD++NAFL GD +EE+YM
Sbjct: 151 VAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYM 210
Query: 1081 KLPPGFSTK-GE----QRVCKLNKSLYGLKQASRQWFSKFSSVLLQRGFVQSFADYSLFT 1135
KLPPG++ + G+ VC L KS+YGLKQASRQWF KFS L+ GFVQS +D++ F
Sbjct: 211 KLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFL 270
Query: 1136 YSKGHCHIYVLVYVDDIIITGNNDKAISSLKDFLDKTFSLKDLGLLKYFLGIEVSCSSKG 1195
+ VLVYVDDIII NND A+ LK L F L+DLG LKYFLG+E++ S+ G
Sbjct: 271 KITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAG 330
Query: 1196 IFLCQRRYTLDILEDSGLTASRPSSFPMDQKLRLTSDDGTLLPDPTPYRRLIGRLIYLTV 1255
I +CQR+Y LD+L+++GL +PSS PMD + ++ G D YRRLIGRL+YL +
Sbjct: 331 INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQI 390
Query: 1256 TRPDITFAVNTLSQFMQSPRSSHLDAAHKVLRYLKGSFGKGIFLSSSSSLHVSGYSDSDW 1315
TR DI+FAVN LSQF ++PR +H A K+L Y+KG+ G+G+F SS + + + +SD+ +
Sbjct: 391 TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASF 450
Query: 1316 AGCPTSRKSTTGYITFLGTSPLSWKSKKQSTIARSSAEAEYRALASLTCELQWLKFLLHD 1375
C +R+ST GY FLGTS +SWKSKKQ +++SSAEAEYRAL+ T E+ WL +
Sbjct: 451 QSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRE 510
Query: 1376 LGVSHNDPMSVFCDNKAALHIAENPVFHERTKHIEIDCHLVREK-IKTKLIAPCYTSTKE 1434
L + + P +FCDN AA+HIA N VFHERTKHIE DCH VRE+ + ++ + + E
Sbjct: 511 LQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYDE 570
Query: 1435 QLAVI-FTKPLGADTFQHLIGKLGISNLSS 1463
Q + P+ T +++ G++ L +
Sbjct: 571 QDGFTEYLSPILRGTIMYIVSMFGLAGLEA 600
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 565 bits (1456), Expect = e-180, Method: Compositional matrix adjust.
Identities = 275/570 (48%), Positives = 382/570 (67%), Gaps = 12/570 (2%)
Query: 901 RLRRPPSRLNDYICNALPSTTSHDMVSYPLTDYISFDSFSDHHKNFLASVLSNTEPRNYS 960
R R P+ L DY C+++ S T HD ++ ++S++ S + +FL + EP Y+
Sbjct: 36 RRTRKPAYLQDYYCHSVASLTIHD-----ISQFLSYEKVSPLYHSFLVCIAKAKEPSTYN 90
Query: 961 QAMTSSHWREAMAKEISALESNKTWSLVDLPPGKRPIGCKWVYKIKHRSDGSIERYKARL 1020
+A W AM EI A+E+ TW + LPP K+PIGCKWVYKIK+ SDG+IERYKARL
Sbjct: 91 EAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARL 150
Query: 1021 VAKGYTQIEGLDYTDTFAPVAKLVTIRALLSIASIQGWTLHQLDVNNAFLQGDREEEVYM 1080
VAKGYTQ EG+D+ +TF+PV KL +++ +L+I++I +TLHQLD++NAFL GD +EE+YM
Sbjct: 151 VAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYM 210
Query: 1081 KLPPGFSTK-GE----QRVCKLNKSLYGLKQASRQWFSKFSSVLLQRGFVQSFADYSLFT 1135
KLPPG++ + G+ VC L KS+YGLKQASRQWF KFS L+ GFVQS +D++ F
Sbjct: 211 KLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFL 270
Query: 1136 YSKGHCHIYVLVYVDDIIITGNNDKAISSLKDFLDKTFSLKDLGLLKYFLGIEVSCSSKG 1195
+ VLVYVDDIII NND A+ LK L F L+DLG LKYFLG+E++ S+ G
Sbjct: 271 KITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAG 330
Query: 1196 IFLCQRRYTLDILEDSGLTASRPSSFPMDQKLRLTSDDGTLLPDPTPYRRLIGRLIYLTV 1255
I +CQR+Y LD+L+++GL +PSS PMD + ++ G D YRRLIGRL+YL +
Sbjct: 331 INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQI 390
Query: 1256 TRPDITFAVNTLSQFMQSPRSSHLDAAHKVLRYLKGSFGKGIFLSSSSSLHVSGYSDSDW 1315
TR DI+FAVN LSQF ++PR +H A K+L Y+KG+ G+G+F SS + + + +SD+ +
Sbjct: 391 TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASF 450
Query: 1316 AGCPTSRKSTTGYITFLGTSPLSWKSKKQSTIARSSAEAEYRALASLTCELQWLKFLLHD 1375
C +R+ST GY FLGTS +SWKSKKQ +++SSAEAEYRAL+ T E+ WL +
Sbjct: 451 QSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRE 510
Query: 1376 LGVSHNDPMSVFCDNKAALHIAENPVFHERTKHIEIDCHLVREK-IKTKLIAPCYTSTKE 1434
L + + P +FCDN AA+HIA N VFHERTKHIE DCH VRE+ + ++ + + E
Sbjct: 511 LQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYDE 570
Query: 1435 QLAVI-FTKPLGADTFQHLIGKLGISNLSS 1463
Q + P+ T +++ G++ L +
Sbjct: 571 QDGFTEYLSPILRGTIMYIVSMFGLAGLEA 600
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 212 bits (539), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 102/226 (45%), Positives = 152/226 (67%), Gaps = 1/226 (0%)
Query: 1143 IYVLVYVDDIIITGNNDKAISSLKDFLDKTFSLKDLGLLKYFLGIEVSCSSKGIFLCQRR 1202
+Y+L+YVDDI++TG+++ ++ L L TFS+KDLG + YFLGI++ G+FL Q +
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60
Query: 1203 YTLDILEDSGLTASRPSSFPMDQKLRLTSDDGTLLPDPTPYRRLIGRLIYLTVTRPDITF 1262
Y IL ++G+ +P S P+ KL +S PDP+ +R ++G L YLT+TRPDI++
Sbjct: 61 YAEQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISY 119
Query: 1263 AVNTLSQFMQSPRSSHLDAAHKVLRYLKGSFGKGIFLSSSSSLHVSGYSDSDWAGCPTSR 1322
AVN + Q M P + D +VLRY+KG+ G+++ +S L+V + DSDWAGC ++R
Sbjct: 120 AVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTR 179
Query: 1323 KSTTGYITFLGTSPLSWKSKKQSTIARSSAEAEYRALASLTCELQW 1368
+STTG+ TFLG + +SW +K+Q T++RSS E EYRALA EL W
Sbjct: 180 RSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>AT1G21280.1 | Copia-like polyprotein/retrotransposon |
Chr1:7447690-7448403 REVERSE LENGTH=237 | 201606
Length = 237
Score = 120 bits (300), Expect = 6e-30, Method: Composition-based stats.
Identities = 72/225 (32%), Positives = 119/225 (52%), Gaps = 15/225 (6%)
Query: 9 INVSASQSSPSF---DVHHSDSPTTVLITPLLSG-DNYPSWARAMKMALRAKNKFVFVDG 64
++ ++ SP + D+HH P+ I L DNY +W + LR KF F+DG
Sbjct: 8 VSPTSDPDSPYYLPPDIHH---PSDFSIQKLSKDEDNYVAWKIRFRSFLRVTKKFGFIDG 64
Query: 65 TIPRPTSTDELHS-WDRCNDLVTSWLLNSVDPDIRQSILYDESAAEIWRNLHERFHQTNA 123
T+P+P L+ W++CN +V WL+NS+ + +S++Y E+A ++W +L F
Sbjct: 65 TLPKPDPFSPLYQPWEQCNAMVMYWLMNSMTDKLLESVMYAETAHKMWEDLRRVFVPCVD 124
Query: 124 PKIFQLKRAISCLKQDGSDVSAYFTRLKSLQDELNSLNAIEPCICGH-----GKSLFERY 178
KI+QL+R ++ L+Q G V YF +L + EL+ I C CG K E
Sbjct: 125 LKIYQLRRRLATLRQGGDSVEEYFGKLSKVWMELSEYAPIPECKCGGCNCECTKRAEEAR 184
Query: 179 NQDRAMEFLQG--LHERFSAIRSQILLMEPFPSILRIHSLVKQEE 221
+++ EFL G L++ F A+ ++I+ +P PS+ ++VK E
Sbjct: 185 EKEQRYEFLMGLKLNQGFEAVTTKIMFQKPPPSLHEAFAMVKDAE 229
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase) |
ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 103 bits (256), Expect = 8e-25, Method: Composition-based stats.
Identities = 46/99 (46%), Positives = 68/99 (68%)
Query: 955 EPRNYSQAMTSSHWREAMAKEISALESNKTWSLVDLPPGKRPIGCKWVYKIKHRSDGSIE 1014
EP++ A+ W +AM +E+ AL NKTW LV P + +GCKWV+K K SDG+++
Sbjct: 27 EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86
Query: 1015 RYKARLVAKGYTQIEGLDYTDTFAPVAKLVTIRALLSIA 1053
R KARLVAKG+ Q EG+ + +T++PV + TIR +L++A
Sbjct: 87 RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125