BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000076.1_g0170.1
(152 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G13770.1 | nuclease | Chr2:5736603-5737847 FORWARD LENGTH=343... 119 9e-33
AT3G22935.1 | hypothetical protein | Chr3:8130391-8131130 FORWAR... 55 4e-10
>AT2G13770.1 | nuclease | Chr2:5736603-5737847 FORWARD LENGTH=343 |
201606
Length = 343
Score = 119 bits (297), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 64/83 (77%)
Query: 10 YLADGIYPQWGTLVKTTANPYGLKEAYFAKRQESVRKDVERAFGVLQARWGIIRGPSHWW 69
YLADGIYP+W TLV+T +P G K+ FA +QE+ RKDVERAFGVLQ R+ I+ GPS W
Sbjct: 226 YLADGIYPKWSTLVQTIHDPRGPKKKLFAMKQEACRKDVERAFGVLQLRFAIVAGPSRLW 285
Query: 70 DVKTMSDIMKACIIMHNMIIEDE 92
+ + DIM +CIIMHNMIIEDE
Sbjct: 286 NKTVLHDIMTSCIIMHNMIIEDE 308
>AT3G22935.1 | hypothetical protein | Chr3:8130391-8131130 FORWARD
LENGTH=157 | 201606
Length = 157
Score = 55.5 bits (132), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Query: 62 IRGPSHWWDVKTMSDIMKACIIMHNMIIEDE----GP---NATINVEGCEMNLIDRGENL 114
+ GPS W+ + DIM +CIIMHNMIIEDE P + +E EM D +
Sbjct: 63 VTGPSRLWNKTILHDIMTSCIIMHNMIIEDERDIDAPIEERVEVPIEEVEMTGDD--DTR 120
Query: 115 SDEVLERVGRVRSQEIRTRLKADLVEHIWITRSNDDN 151
E L R +++ +E L+ L++H+W +N +N
Sbjct: 121 FQEFLARHRQIKDREAHIELRNALIKHLWSQYTNSEN 157