BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000076.1_g0410.1
(229 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 114 7e-29
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 114 7e-29
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 64 3e-12
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 114 bits (285), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 97/179 (54%), Gaps = 3/179 (1%)
Query: 6 YASAIGSIMYAMICTLPDVSYALSMCSRYQSNPGEAHWSAVKNILKYLRRTKDHFLTYGG 65
Y IG +MY I L D+S+A++ S++ P AH AV IL Y++ T L Y
Sbjct: 378 YRRLIGRLMYLQITRL-DISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSS 436
Query: 66 EDTLKVVSHVDGSFQTDKDDFKSQSGYVYCLNGGAVSWKSFKQSTIADSTTEAEYLAASV 125
+ +++ D SFQ+ KD +S +GY L +SWKS KQ ++ S+ EAEY A S
Sbjct: 437 QAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSF 496
Query: 126 AAKEGVWIKKFIIELGVVPGIEEGVTLYCDNNRAIAQAKEPRAHQKSKHIQRKYHLIRE 184
A E +W+ +F EL + + + L+CDN AI A H+++KHI+ H +RE
Sbjct: 497 ATDEMMWLAQFFRELQL--PLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 114 bits (285), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 97/179 (54%), Gaps = 3/179 (1%)
Query: 6 YASAIGSIMYAMICTLPDVSYALSMCSRYQSNPGEAHWSAVKNILKYLRRTKDHFLTYGG 65
Y IG +MY I L D+S+A++ S++ P AH AV IL Y++ T L Y
Sbjct: 378 YRRLIGRLMYLQITRL-DISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSS 436
Query: 66 EDTLKVVSHVDGSFQTDKDDFKSQSGYVYCLNGGAVSWKSFKQSTIADSTTEAEYLAASV 125
+ +++ D SFQ+ KD +S +GY L +SWKS KQ ++ S+ EAEY A S
Sbjct: 437 QAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSF 496
Query: 126 AAKEGVWIKKFIIELGVVPGIEEGVTLYCDNNRAIAQAKEPRAHQKSKHIQRKYHLIRE 184
A E +W+ +F EL + + + L+CDN AI A H+++KHI+ H +RE
Sbjct: 497 ATDEMMWLAQFFRELQL--PLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 64.3 bits (155), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 65/127 (51%), Gaps = 1/127 (0%)
Query: 6 YASAIGSIMYAMICTLPDVSYALSMCSRYQSNPGEAHWSAVKNILKYLRRTKDHFLTYGG 65
+ S +G++ Y + T PD+SYA+++ + P A + +K +L+Y++ T H L
Sbjct: 100 FRSIVGALQY-LTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHK 158
Query: 66 EDTLKVVSHVDGSFQTDKDDFKSQSGYVYCLNGGAVSWKSFKQSTIADSTTEAEYLAASV 125
L V + D + +S +G+ L +SW + +Q T++ S+TE EY A ++
Sbjct: 159 NSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALAL 218
Query: 126 AAKEGVW 132
A E W
Sbjct: 219 TAAELTW 225