BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000076.1_g0450.1
(696 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G66810.1 | Ran-binding protein in the microtubule-organising ... 715 0.0
AT5G66810.3 | Ran-binding protein in the microtubule-organising ... 566 0.0
AT5G66810.4 | Ran-binding protein in the microtubule-organising ... 526 0.0
AT5G66810.2 | Ran-binding protein in the microtubule-organising ... 504 e-172
AT1G61150.7 | LisH and RanBPM domains containing protein | Chr1:... 52 3e-07
>AT5G66810.1 | Ran-binding protein in the microtubule-organising
centre protein | Chr5:26672926-26676450 FORWARD
LENGTH=750 | 201606
Length = 750
Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/730 (56%), Positives = 502/730 (68%), Gaps = 70/730 (9%)
Query: 1 MDSTIPVNWEALDSLIINFAKSENLLEEESITSSSSSSPPSSPSSSS--------YRSRL 52
MDST PVNWEALD+LII+F SENL+E+ + +S SP SSPSSSS Y SRL
Sbjct: 57 MDST-PVNWEALDALIIDFVSSENLVEDAAAAVNSPPSPLSSPSSSSSPSISSSSYHSRL 115
Query: 53 VIRQIRRLLEIGDIDSAIDLLRIHATFVLDDHRLLFRLQKQD---------RDSAIECLR 103
+IR+IR +E GDI++AID+LR HA FVLDDHR+LFRLQKQ ++AI+CLR
Sbjct: 116 IIRRIRSSIESGDIETAIDILRSHAPFVLDDHRILFRLQKQKFIELLRKGTHEAAIDCLR 175
Query: 104 TSLAPCALDAYPEAYEEFKHVLLAFIFDKDDETSPVANEWSEKRRFDLAGLLSSVLRVHL 163
T +APCALDAYPEAYEEFKHVLLA I+DKDD+TSPVANEW+EKRR+++AGL+SSVLR L
Sbjct: 176 TCVAPCALDAYPEAYEEFKHVLLALIYDKDDQTSPVANEWAEKRRYEMAGLMSSVLRASL 235
Query: 164 HAFDPIFSMTLRYLISIHKGFCFRQGIPSPISNLTERLLLEERDLAPTPQESLLEAPPFD 223
A+DP+FSMTLRYLISIHKGFCF QGI S +S+LT RLLLEERD TP ES+ E PPFD
Sbjct: 236 QAYDPVFSMTLRYLISIHKGFCFHQGISSAVSDLTHRLLLEERDAPATPIESMYEVPPFD 295
Query: 224 EVDVQALAHAVDLTRQGAIDSLRFAKGDLFQAFKNELCRMKLDVAVLDELVQEYCIYRGI 283
EVD+QALAHAV+LTRQGA+DS++FAKGDLFQAF+NELCRM+LDV+VLDELV+EYCIYRGI
Sbjct: 296 EVDIQALAHAVELTRQGAVDSMKFAKGDLFQAFQNELCRMRLDVSVLDELVKEYCIYRGI 355
Query: 284 VDG-----GFPSSYEKQSLGRTPDPSNGSVVDCSLDMDCLPSKDSDGETSVTSVSIPG-- 336
VD P+ + +GR+ DCS ++D S+ SD E + G
Sbjct: 356 VDSEMQMITIPAKRNQSEVGRSLSR------DCSSEIDLNTSQHSDIENYSNKSMLDGSL 409
Query: 337 -MDGPQEIEMQGTNAQQRSPYEMESNREDCSTSFS---ENFRRFHRTRGHGTGERSGRKR 392
D E +G + R E S EDCSTS+S EN R R R H E + RKR
Sbjct: 410 TYDTEMSCE-EGGDVGTRYGSEPTSVCEDCSTSWSNQCENTRALLRIRSHMNSEGNKRKR 468
Query: 393 WRGRTEELEVTPAICPSGDGKPGYSSYAEVAESYKLSEEQVPLKRPASEVAKAEGYKYDI 452
W GRT E++ P I S+A E+ KY+I
Sbjct: 469 WCGRTAEMDCLPRI-----------SFANSESGTNPIED-----------------KYEI 500
Query: 453 VLEMKELTRKGMAAEVVEEINAMDPSFFPKNPVLLFQLKQVEFLKLVKSGDHSGALKVAS 512
L +KEL +GMAAE EI+ MDP FF +NP LLF LKQVEFLKLV +GDH+GALKVA
Sbjct: 501 ALALKELVSRGMAAEAFSEISTMDPDFFTQNPGLLFHLKQVEFLKLVSAGDHNGALKVAC 560
Query: 513 SYLGPSAASNPTLLKPLKETLLALLSPNGDASAKGIPLSILATSLQVALGRRLGIEEPQL 572
+LGP AA++ +LLK LKETLL LL P+G A K +PL+ LA +LQV++G RLGIEEP+L
Sbjct: 561 FHLGPLAANDQSLLKTLKETLLVLLQPDGTAPGKDLPLNDLANTLQVSVGNRLGIEEPKL 620
Query: 573 MKIVRETLHTHNEWFKLQMCKDRFEGLLKIDSLKEINCPIVIDGTSNTNADTDTP-GSSQ 631
MKI++ TLHTH EWFKLQMCKDRF LLKIDSLKE+N ++ S + D++T S
Sbjct: 621 MKIIKATLHTHTEWFKLQMCKDRFNNLLKIDSLKEVNTDLIGAIKSKSKKDSNTNLSSQV 680
Query: 632 VTISSSSRMAEDSSSP-----TQVSSRDVLSDENAILKVMEFLALPRADAIHLLAQYNGN 686
T SSS+ +ED S TQ R+ L +E+AILKVMEFLA+PR+DAI LL+QYNG+
Sbjct: 681 TTTSSSTMTSEDGGSSSLMMMTQTLPREALWEESAILKVMEFLAMPRSDAIQLLSQYNGD 740
Query: 687 AETVIQQLFA 696
AE VIQQLF
Sbjct: 741 AEAVIQQLFG 750
>AT5G66810.3 | Ran-binding protein in the microtubule-organising
centre protein | Chr5:26672926-26675912 FORWARD
LENGTH=637 | 201606
Length = 637
Score = 566 bits (1459), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/589 (55%), Positives = 399/589 (67%), Gaps = 64/589 (10%)
Query: 1 MDSTIPVNWEALDSLIINFAKSENLLEEESITSSSSSSPPSSPSSSS--------YRSRL 52
MDST PVNWEALD+LII+F SENL+E+ + +S SP SSPSSSS Y SRL
Sbjct: 57 MDST-PVNWEALDALIIDFVSSENLVEDAAAAVNSPPSPLSSPSSSSSPSISSSSYHSRL 115
Query: 53 VIRQIRRLLEIGDIDSAIDLLRIHATFVLDDHRLLFRLQKQD---------RDSAIECLR 103
+IR+IR +E GDI++AID+LR HA FVLDDHR+LFRLQKQ ++AI+CLR
Sbjct: 116 IIRRIRSSIESGDIETAIDILRSHAPFVLDDHRILFRLQKQKFIELLRKGTHEAAIDCLR 175
Query: 104 TSLAPCALDAYPEAYEEFKHVLLAFIFDKDDETSPVANEWSEKRRFDLAGLLSSVLRVHL 163
T +APCALDAYPEAYEEFKHVLLA I+DKDD+TSPVANEW+EKRR+++AGL+SSVLR L
Sbjct: 176 TCVAPCALDAYPEAYEEFKHVLLALIYDKDDQTSPVANEWAEKRRYEMAGLMSSVLRASL 235
Query: 164 HAFDPIFSMTLRYLISIHKGFCFRQGIPSPISNLTERLLLEERDLAPTPQESLLEAPPFD 223
A+DP+FSMTLRYLISIHKGFCF QGI S +S+LT RLLLEERD TP ES+ E PPFD
Sbjct: 236 QAYDPVFSMTLRYLISIHKGFCFHQGISSAVSDLTHRLLLEERDAPATPIESMYEVPPFD 295
Query: 224 EVDVQALAHAVDLTRQGAIDSLRFAKGDLFQAFKNELCRMKLDVAVLDELVQEYCIYRGI 283
EVD+QALAHAV+LTRQGA+DS++FAKGDLFQAF+NELCRM+LDV+VLDELV+EYCIYRGI
Sbjct: 296 EVDIQALAHAVELTRQGAVDSMKFAKGDLFQAFQNELCRMRLDVSVLDELVKEYCIYRGI 355
Query: 284 VDG-----GFPSSYEKQSLGRTPDPSNGSVVDCSLDMDCLPSKDSDGETSVTSVSIPG-- 336
VD P+ + +GR+ DCS ++D S+ SD E + G
Sbjct: 356 VDSEMQMITIPAKRNQSEVGRSLSR------DCSSEIDLNTSQHSDIENYSNKSMLDGSL 409
Query: 337 -MDGPQEIEMQGTNAQQRSPYEMESNREDCSTSFS---ENFRRFHRTRGHGTGERSGRKR 392
D E +G + R E S EDCSTS+S EN R R R H E + RKR
Sbjct: 410 TYDTEMSCE-EGGDVGTRYGSEPTSVCEDCSTSWSNQCENTRALLRIRSHMNSEGNKRKR 468
Query: 393 WRGRTEELEVTPAICPSGDGKPGYSSYAEVAESYKLSEEQVPLKRPASEVAKAEGYKYDI 452
W GRT E++ P I S+A E+ KY+I
Sbjct: 469 WCGRTAEMDCLPRI-----------SFANSESGTNPIED-----------------KYEI 500
Query: 453 VLEMKELTRKGMAAEVVEEINAMDPSFFPKNPVLLFQLKQVEFLKLVKSGDHSGALKVAS 512
L +KEL +GMAAE EI+ MDP FF +NP LLF LKQVEFLKLV +GDH+GALKVA
Sbjct: 501 ALALKELVSRGMAAEAFSEISTMDPDFFTQNPGLLFHLKQVEFLKLVSAGDHNGALKVAC 560
Query: 513 SYLGPSAASNPTLLKPLKETLLALLSPNGDASAKGIPLSILATSLQVAL 561
+LGP AA++ +LLK LKETLL LL P+G A K +PL+ LA +LQV +
Sbjct: 561 FHLGPLAANDQSLLKTLKETLLVLLQPDGTAPGKDLPLNDLANTLQVTM 609
>AT5G66810.4 | Ran-binding protein in the microtubule-organising
centre protein | Chr5:26674062-26676450 FORWARD
LENGTH=528 | 201606
Length = 528
Score = 526 bits (1356), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/563 (54%), Positives = 372/563 (66%), Gaps = 52/563 (9%)
Query: 151 LAGLLSSVLRVHLHAFDPIFSMTLRYLISIHKGFCFRQGIPSPISNLTERLLLEERDLAP 210
+AGL+SSVLR L A+DP+FSMTLRYLISIHKGFCF QGI S +S+LT RLLLEERD
Sbjct: 1 MAGLMSSVLRASLQAYDPVFSMTLRYLISIHKGFCFHQGISSAVSDLTHRLLLEERDAPA 60
Query: 211 TPQESLLEAPPFDEVDVQALAHAVDLTRQGAIDSLRFAKGDLFQAFKNELCRMKLDVAVL 270
TP ES+ E PPFDEVD+QALAHAV+LTRQGA+DS++FAKGDLFQAF+NELCRM+LDV+VL
Sbjct: 61 TPIESMYEVPPFDEVDIQALAHAVELTRQGAVDSMKFAKGDLFQAFQNELCRMRLDVSVL 120
Query: 271 DELVQEYCIYRGIVDG-----GFPSSYEKQSLGRTPDPSNGSVVDCSLDMDCLPSKDSDG 325
DELV+EYCIYRGIVD P+ + +GR+ DCS ++D S+ SD
Sbjct: 121 DELVKEYCIYRGIVDSEMQMITIPAKRNQSEVGRSLSR------DCSSEIDLNTSQHSDI 174
Query: 326 ETSVTSVSIPG---MDGPQEIEMQGTNAQQRSPYEMESNREDCSTSFS---ENFRRFHRT 379
E + G D E +G + R E S EDCSTS+S EN R R
Sbjct: 175 ENYSNKSMLDGSLTYDTEMSCE-EGGDVGTRYGSEPTSVCEDCSTSWSNQCENTRALLRI 233
Query: 380 RGHGTGERSGRKRWRGRTEELEVTPAICPSGDGKPGYSSYAEVAESYKLSEEQVPLKRPA 439
R H E + RKRW GRT E++ P I S+A E+
Sbjct: 234 RSHMNSEGNKRKRWCGRTAEMDCLPRI-----------SFANSESGTNPIED-------- 274
Query: 440 SEVAKAEGYKYDIVLEMKELTRKGMAAEVVEEINAMDPSFFPKNPVLLFQLKQVEFLKLV 499
KY+I L +KEL +GMAAE EI+ MDP FF +NP LLF LKQVEFLKLV
Sbjct: 275 ---------KYEIALALKELVSRGMAAEAFSEISTMDPDFFTQNPGLLFHLKQVEFLKLV 325
Query: 500 KSGDHSGALKVASSYLGPSAASNPTLLKPLKETLLALLSPNGDASAKGIPLSILATSLQV 559
+GDH+GALKVA +LGP AA++ +LLK LKETLL LL P+G A K +PL+ LA +LQV
Sbjct: 326 SAGDHNGALKVACFHLGPLAANDQSLLKTLKETLLVLLQPDGTAPGKDLPLNDLANTLQV 385
Query: 560 ALGRRLGIEEPQLMKIVRETLHTHNEWFKLQMCKDRFEGLLKIDSLKEINCPIVIDGTSN 619
++G RLGIEEP+LMKI++ TLHTH EWFKLQMCKDRF LLKIDSLKE+N ++ S
Sbjct: 386 SVGNRLGIEEPKLMKIIKATLHTHTEWFKLQMCKDRFNNLLKIDSLKEVNTDLIGAIKSK 445
Query: 620 TNADTDTP-GSSQVTISSSSRMAEDSSSP-----TQVSSRDVLSDENAILKVMEFLALPR 673
+ D++T S T SSS+ +ED S TQ R+ L +E+AILKVMEFLA+PR
Sbjct: 446 SKKDSNTNLSSQVTTTSSSTMTSEDGGSSSLMMMTQTLPREALWEESAILKVMEFLAMPR 505
Query: 674 ADAIHLLAQYNGNAETVIQQLFA 696
+DAI LL+QYNG+AE VIQQLF
Sbjct: 506 SDAIQLLSQYNGDAEAVIQQLFG 528
>AT5G66810.2 | Ran-binding protein in the microtubule-organising
centre protein | Chr5:26672926-26675650 FORWARD
LENGTH=591 | 201606
Length = 591
Score = 504 bits (1299), Expect = e-172, Method: Compositional matrix adjust.
Identities = 287/521 (55%), Positives = 345/521 (66%), Gaps = 64/521 (12%)
Query: 1 MDSTIPVNWEALDSLIINFAKSENLLEEESIT--------SSSSSSPPSSPSSSSYRSRL 52
MDST PVNWEALD+LII+F SENL+E+ + SS SSS S SSSSY SRL
Sbjct: 57 MDST-PVNWEALDALIIDFVSSENLVEDAAAAVNSPPSPLSSPSSSSSPSISSSSYHSRL 115
Query: 53 VIRQIRRLLEIGDIDSAIDLLRIHATFVLDDHRLLFRLQKQD---------RDSAIECLR 103
+IR+IR +E GDI++AID+LR HA FVLDDHR+LFRLQKQ ++AI+CLR
Sbjct: 116 IIRRIRSSIESGDIETAIDILRSHAPFVLDDHRILFRLQKQKFIELLRKGTHEAAIDCLR 175
Query: 104 TSLAPCALDAYPEAYEEFKHVLLAFIFDKDDETSPVANEWSEKRRFDLAGLLSSVLRVHL 163
T +APCALDAYPEAYEEFKHVLLA I+DKDD+TSPVANEW+EKRR+++AGL+SSVLR L
Sbjct: 176 TCVAPCALDAYPEAYEEFKHVLLALIYDKDDQTSPVANEWAEKRRYEMAGLMSSVLRASL 235
Query: 164 HAFDPIFSMTLRYLISIHKGFCFRQGIPSPISNLTERLLLEERDLAPTPQESLLEAPPFD 223
A+DP+FSMTLRYLISIHKGFCF QGI S +S+LT RLLLEERD TP ES+ E PPFD
Sbjct: 236 QAYDPVFSMTLRYLISIHKGFCFHQGISSAVSDLTHRLLLEERDAPATPIESMYEVPPFD 295
Query: 224 EVDVQALAHAVDLTRQGAIDSLRFAKGDLFQAFKNELCRMKLDVAVLDELVQEYCIYRGI 283
EVD+QALAHAV+LTRQGA+DS++FAKGDLFQAF+NELCRM+LDV+VLDELV+EYCIYRGI
Sbjct: 296 EVDIQALAHAVELTRQGAVDSMKFAKGDLFQAFQNELCRMRLDVSVLDELVKEYCIYRGI 355
Query: 284 VDG-----GFPSSYEKQSLGRTPDPSNGSVVDCSLDMDCLPSKDSDGETSVTSVSIPG-- 336
VD P+ + +GR+ DCS ++D S+ SD E + G
Sbjct: 356 VDSEMQMITIPAKRNQSEVGRSLSR------DCSSEIDLNTSQHSDIENYSNKSMLDGSL 409
Query: 337 -MDGPQEIEMQGTNAQQRSPYEMESNREDCSTSFS---ENFRRFHRTRGHGTGERSGRKR 392
D E +G + R E S EDCSTS+S EN R R R H E + RKR
Sbjct: 410 TYDTEMSCE-EGGDVGTRYGSEPTSVCEDCSTSWSNQCENTRALLRIRSHMNSEGNKRKR 468
Query: 393 WRGRTEELEVTPAICPSGDGKPGYSSYAEVAESYKLSEEQVPLKRPASEVAKAEGYKYDI 452
W GRT E++ P I S+A E+ KY+I
Sbjct: 469 WCGRTAEMDCLPRI-----------SFANSESGTNPIED-----------------KYEI 500
Query: 453 VLEMKELTRKGMAAEVVEEINAMDPSFFPKNPVLLFQLKQV 493
L +KEL +GMAAE EI+ MDP FF +NP LLF LKQV
Sbjct: 501 ALALKELVSRGMAAEAFSEISTMDPDFFTQNPGLLFHLKQV 541
>AT1G61150.7 | LisH and RanBPM domains containing protein |
Chr1:22543304-22544355 FORWARD LENGTH=193 | 201606
Length = 193
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 51/104 (49%)
Query: 434 PLKRPASEVAKAEGYKYDIVLEMKELTRKGMAAEVVEEINAMDPSFFPKNPVLLFQLKQV 493
P + P E A+ + + +K+ + G + +E++N ++P NP L F L+Q
Sbjct: 13 PFELPYRETAEIDLATITDRMAVKKAVQNGNVEDAIEKVNDLNPEILDTNPELFFHLQQQ 72
Query: 494 EFLKLVKSGDHSGALKVASSYLGPSAASNPTLLKPLKETLLALL 537
++L++ G AL+ A L P N L+ L++T+ L+
Sbjct: 73 RLIELIRQGKTEEALEFAQEELAPRGEENQAFLEELEKTVALLV 116