BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000076.1_g0570.1
(309 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1... 85 5e-18
>AT1G43760.1 | DNAse I-like superfamily protein |
Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
Length = 626
Score = 84.7 bits (208), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 93/182 (51%), Gaps = 9/182 (4%)
Query: 121 ERFWKLQSRDNIITLGDRNTRFFHA--LASARKINIKILGLQNPEGEWEVDPPAISKLLN 178
E F++ +SR + GD NTRFFH LA+ K IK L + + V + +++
Sbjct: 432 ESFYRQKSRIKWLQDGDANTRFFHKVILANQAKNLIKFLRMDDDVRVENVT--QVKEMIV 489
Query: 179 SHFLQLLST----TFPPQADFIQDIFQPVISRETNNTLTAIPSADEISQVVHDFKADKSP 234
+++ LL + P I+DI + + L+A+PS EI+ V +K+P
Sbjct: 490 AYYTHLLGSDSDILTPDSVQRIKDIHPFRCNDTLASRLSALPSDKEITAAVFAMPRNKAP 549
Query: 235 GPDGFSPSFFQQNLDLVAEDTIKMVQTFFQTHH-LPPLNQTHITLIPKTKSASSSTDFRP 293
GPD F+ FF ++ +V + TI V+ FF+T H L N T ITLIPK + FRP
Sbjct: 550 GPDSFTAEFFWESWFVVKDSTIAAVKEFFRTGHLLKRFNATAITLIPKVTGVDQLSMFRP 609
Query: 294 IS 295
+S
Sbjct: 610 VS 611