BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000076.1_g0710.1
         (123 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G42890.1 | sterol carrier protein 2 | Chr5:17194458-17195910 ...   191   2e-64

>AT5G42890.1 | sterol carrier protein 2 | Chr5:17194458-17195910
           REVERSE LENGTH=123 | 201606
          Length = 123

 Score =  191 bits (486), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 97/124 (78%), Positives = 111/124 (89%), Gaps = 2/124 (1%)

Query: 1   MANKSSLKSAALLEQMKLHLATDAGKETTKKIGLVYQLNIAPKKIGIDEEIYIVDLKKGE 60
           MAN + LKS A+++ MK HL+TDAGKE T+KIGLVYQ+NIAPKK+G +E  YIVDLKKGE
Sbjct: 1   MAN-TQLKSDAIMDMMKEHLSTDAGKEVTEKIGLVYQINIAPKKLGFEEVTYIVDLKKGE 59

Query: 61  VTKGPYEG-KPDATFSFKDEDFLKVATGKMNPQIAFMRGAMKIKGSLSAATKFTPDIFPK 119
           VTKG YEG K DATFSFKD+DF+KVATGKMNPQ+AF+RGAMKIKGSLSAA KFTPDIFPK
Sbjct: 60  VTKGKYEGGKVDATFSFKDDDFVKVATGKMNPQMAFIRGAMKIKGSLSAAQKFTPDIFPK 119

Query: 120 PSKM 123
           PSK+
Sbjct: 120 PSKL 123


Top