BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000076.1_g0710.1
(123 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G42890.1 | sterol carrier protein 2 | Chr5:17194458-17195910 ... 191 2e-64
>AT5G42890.1 | sterol carrier protein 2 | Chr5:17194458-17195910
REVERSE LENGTH=123 | 201606
Length = 123
Score = 191 bits (486), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 97/124 (78%), Positives = 111/124 (89%), Gaps = 2/124 (1%)
Query: 1 MANKSSLKSAALLEQMKLHLATDAGKETTKKIGLVYQLNIAPKKIGIDEEIYIVDLKKGE 60
MAN + LKS A+++ MK HL+TDAGKE T+KIGLVYQ+NIAPKK+G +E YIVDLKKGE
Sbjct: 1 MAN-TQLKSDAIMDMMKEHLSTDAGKEVTEKIGLVYQINIAPKKLGFEEVTYIVDLKKGE 59
Query: 61 VTKGPYEG-KPDATFSFKDEDFLKVATGKMNPQIAFMRGAMKIKGSLSAATKFTPDIFPK 119
VTKG YEG K DATFSFKD+DF+KVATGKMNPQ+AF+RGAMKIKGSLSAA KFTPDIFPK
Sbjct: 60 VTKGKYEGGKVDATFSFKDDDFVKVATGKMNPQMAFIRGAMKIKGSLSAAQKFTPDIFPK 119
Query: 120 PSKM 123
PSK+
Sbjct: 120 PSKL 123