BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000076.1_g0730.1
(156 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 57 5e-10
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 57 5e-10
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 49 3e-07
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 57.4 bits (137), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 68/155 (43%), Gaps = 7/155 (4%)
Query: 2 IGLSQETYIDKILGRFQMKDSKRGFLPMTHGTVLCKTQSPRDLDEQARTTKVPYASAIGS 61
I + Q Y +L + K +PM +D +A Y IG
Sbjct: 331 INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKA------YRRLIGR 384
Query: 62 IMYAMICTRPNVSYALSMCSRYQSDPSEDHWTAAKNILMYLRMRKDPFLVYGGKEALIVE 121
+MY I TR ++S+A++ S++ P H A IL Y++ L Y + + ++
Sbjct: 385 LMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQ 443
Query: 122 GHVDASFQTEKVDFRTQSGYVFCLNGGVVSWKSSK 156
DASFQ+ K R+ +GY L ++SWKS K
Sbjct: 444 VFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKK 478
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 57.4 bits (137), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 68/155 (43%), Gaps = 7/155 (4%)
Query: 2 IGLSQETYIDKILGRFQMKDSKRGFLPMTHGTVLCKTQSPRDLDEQARTTKVPYASAIGS 61
I + Q Y +L + K +PM +D +A Y IG
Sbjct: 331 INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKA------YRRLIGR 384
Query: 62 IMYAMICTRPNVSYALSMCSRYQSDPSEDHWTAAKNILMYLRMRKDPFLVYGGKEALIVE 121
+MY I TR ++S+A++ S++ P H A IL Y++ L Y + + ++
Sbjct: 385 LMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQ 443
Query: 122 GHVDASFQTEKVDFRTQSGYVFCLNGGVVSWKSSK 156
DASFQ+ K R+ +GY L ++SWKS K
Sbjct: 444 VFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKK 478
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 48.9 bits (115), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 16/157 (10%)
Query: 4 LSQETYIDKILGRFQMKDSKRGFLPMTHGTVLCKTQSPRDLDEQARTTKVP----YASAI 59
LSQ Y ++IL M D K PM+ T P L+ T K P + S +
Sbjct: 56 LSQTKYAEQILNNAGMLDCK----PMS-------TPLPLKLNSSVSTAKYPDPSDFRSIV 104
Query: 60 GSIMYAMICTRPNVSYALSMCSRYQSDPSEDHWTAAKNILMYLRMRKDPFLVYGGKEALI 119
G++ Y + TRP++SYA+++ + +P+ + K +L Y++ L L
Sbjct: 105 GALQY-LTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLN 163
Query: 120 VEGHVDASFQTEKVDFRTQSGYVFCLNGGVVSWKSSK 156
V+ D+ + R+ +G+ L ++SW + +
Sbjct: 164 VQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKR 200