BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000076.1_g0760.1
(743 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G24255.7 | RNA-directed DNA polymerase (reverse transcriptase... 116 2e-26
AT3G24255.5 | RNA-directed DNA polymerase (reverse transcriptase... 114 3e-26
AT3G24255.4 | RNA-directed DNA polymerase (reverse transcriptase... 114 3e-26
AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1... 102 3e-22
AT4G29090.1 | Ribonuclease H-like superfamily protein | Chr4:143... 97 1e-20
>AT3G24255.7 | RNA-directed DNA polymerase (reverse
transcriptase)-related family protein |
Chr3:8789309-8793208 FORWARD LENGTH=828 | 201606
Length = 828
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 121/265 (45%), Gaps = 7/265 (2%)
Query: 425 ISHLLFADDCIIFGKNSIENIHNLKDILQDFCDTSGQMINYAKSNNFYSKNSHPKFKRLI 484
I+HL FADD ++F +I + I F D SG I+ KS Y K I
Sbjct: 8 ITHLCFADDLLVFTDGKKSSIEGILQIFGKFADFSGLQISLEKST-IYMAGVKDNDKADI 66
Query: 485 MRALKVRQASTSEKYLGAQLFIGAQKTKVFKDILDQIKNKLSKWSNSFLSQAGRTVVISA 544
+ + + +YLG L T + ++++I+ ++ KW+ LS AGR +IS+
Sbjct: 67 LHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLISS 126
Query: 545 IAAVVPRYQMQCFAIPKGITKSIKSVQRNFWWGKSKGICTK---AWSYICLPKSQGGLGI 601
+ + + M F +P K I S+ +F W + K AWS +C PK +GGLGI
Sbjct: 127 VIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDVCTPKDEGGLGI 186
Query: 602 HLPELDNAALISKMAWRLKTEPEAVWAKLIKAKYFPKTDIPGPAKNH--HSWNWKTIRKQ 659
+ N + K+ WR+ + ++W + ++ K + N SW WK I K
Sbjct: 187 RSLKEANKVSLLKLIWRMLSST-SLWVQWLRLYLLRKGSFWSISGNTTLGSWMWKKILKH 245
Query: 660 YNIISELTTWEVNSGKEVNIWSDNW 684
+ S ++++G + W DNW
Sbjct: 246 RALASGFVKHDIHNGSNTSFWFDNW 270
>AT3G24255.5 | RNA-directed DNA polymerase (reverse
transcriptase)-related family protein |
Chr3:8789309-8790907 FORWARD LENGTH=532 | 201606
Length = 532
Score = 114 bits (284), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 121/265 (45%), Gaps = 7/265 (2%)
Query: 425 ISHLLFADDCIIFGKNSIENIHNLKDILQDFCDTSGQMINYAKSNNFYSKNSHPKFKRLI 484
I+HL FADD ++F +I + I F D SG I+ KS Y K I
Sbjct: 8 ITHLCFADDLLVFTDGKKSSIEGILQIFGKFADFSGLQISLEKST-IYMAGVKDNDKADI 66
Query: 485 MRALKVRQASTSEKYLGAQLFIGAQKTKVFKDILDQIKNKLSKWSNSFLSQAGRTVVISA 544
+ + + +YLG L T + ++++I+ ++ KW+ LS AGR +IS+
Sbjct: 67 LHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLISS 126
Query: 545 IAAVVPRYQMQCFAIPKGITKSIKSVQRNFWWGKSKGICTK---AWSYICLPKSQGGLGI 601
+ + + M F +P K I S+ +F W + K AWS +C PK +GGLGI
Sbjct: 127 VIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDVCTPKDEGGLGI 186
Query: 602 HLPELDNAALISKMAWRLKTEPEAVWAKLIKAKYFPKTDIPGPAKNH--HSWNWKTIRKQ 659
+ N + K+ WR+ + ++W + ++ K + N SW WK I K
Sbjct: 187 RSLKEANKVSLLKLIWRMLSST-SLWVQWLRLYLLRKGSFWSISGNTTLGSWMWKKILKH 245
Query: 660 YNIISELTTWEVNSGKEVNIWSDNW 684
+ S ++++G + W DNW
Sbjct: 246 RALASGFVKHDIHNGSNTSFWFDNW 270
>AT3G24255.4 | RNA-directed DNA polymerase (reverse
transcriptase)-related family protein |
Chr3:8789309-8790907 FORWARD LENGTH=532 | 201606
Length = 532
Score = 114 bits (284), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 121/265 (45%), Gaps = 7/265 (2%)
Query: 425 ISHLLFADDCIIFGKNSIENIHNLKDILQDFCDTSGQMINYAKSNNFYSKNSHPKFKRLI 484
I+HL FADD ++F +I + I F D SG I+ KS Y K I
Sbjct: 8 ITHLCFADDLLVFTDGKKSSIEGILQIFGKFADFSGLQISLEKST-IYMAGVKDNDKADI 66
Query: 485 MRALKVRQASTSEKYLGAQLFIGAQKTKVFKDILDQIKNKLSKWSNSFLSQAGRTVVISA 544
+ + + +YLG L T + ++++I+ ++ KW+ LS AGR +IS+
Sbjct: 67 LHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLISS 126
Query: 545 IAAVVPRYQMQCFAIPKGITKSIKSVQRNFWWGKSKGICTK---AWSYICLPKSQGGLGI 601
+ + + M F +P K I S+ +F W + K AWS +C PK +GGLGI
Sbjct: 127 VIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDVCTPKDEGGLGI 186
Query: 602 HLPELDNAALISKMAWRLKTEPEAVWAKLIKAKYFPKTDIPGPAKNH--HSWNWKTIRKQ 659
+ N + K+ WR+ + ++W + ++ K + N SW WK I K
Sbjct: 187 RSLKEANKVSLLKLIWRMLSST-SLWVQWLRLYLLRKGSFWSISGNTTLGSWMWKKILKH 245
Query: 660 YNIISELTTWEVNSGKEVNIWSDNW 684
+ S ++++G + W DNW
Sbjct: 246 RALASGFVKHDIHNGSNTSFWFDNW 270
>AT1G43760.1 | DNAse I-like superfamily protein |
Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
Length = 626
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 131/282 (46%), Gaps = 15/282 (5%)
Query: 2 SHPDCFNYIAENWK-NIKSNKDQNNIQTDLKKLSTKLTMWNKKVFGNIENNINRIIKELQ 60
+HP + W+ I ++ LK + N++ FGNI++ + L+
Sbjct: 340 THPTFLVSLTVAWEEQIPVGSHMFSLGEHLKAAKKCCKLLNRQGFGNIQHKTKEALDSLE 399
Query: 61 HTKSKEVYKKFNS--ELEELYNQQ--------ESLWKEKSRNNFLNLGDKNTKYFHSQAI 110
+S+ + +S +E + ++ ES +++KSR +L GD NT++FH +
Sbjct: 400 SIQSQLLTNPSDSLFRVEHVARKKWNFFAAALESFYRQKSRIKWLQDGDANTRFFHKVIL 459
Query: 111 QRNRNNKINAIKNNNGDWIEDIKDIQDI---FTTHLLNINTTINPREDPKTQNMFHP-TI 166
N I ++ ++ +E++ ++++ + THLL ++ I + + HP
Sbjct: 460 ANQAKNLIKFLRMDDDVRVENVTQVKEMIVAYYTHLLGSDSDILTPDSVQRIKDIHPFRC 519
Query: 167 SSAQNHDLITIPSLEEIDWPINSLKKEAAPGPDGYPPFFFQSNWDTIRGDIYDLVKNFFL 226
+ L +PS +EI + ++ + APGPD + FF +W ++ VK FF
Sbjct: 520 NDTLASRLSALPSDKEITAAVFAMPRNKAPGPDSFTAEFFWESWFVVKDSTIAAVKEFFR 579
Query: 227 SGYLPPGINHTNICLIPKTSTPQIPADYRPISLLNTTYKVIT 268
+G+L N T I LIPK + + +RP+S YK+IT
Sbjct: 580 TGHLLKRFNATAITLIPKVTGVDQLSMFRPVSCCTVVYKIIT 621
>AT4G29090.1 | Ribonuclease H-like superfamily protein |
Chr4:14333528-14335255 FORWARD LENGTH=575 | 201606
Length = 575
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 102/198 (51%), Gaps = 16/198 (8%)
Query: 548 VVPRYQMQCFAIPKGITKSIKSVQRNFWW---GKSKGICTKAWSYICLPKSQGGLGIHLP 604
+P Y M CF +PK + K I SV +FWW ++KG+ KAW ++ K++GG+G
Sbjct: 2 ALPTYTMACFLLPKTVCKQIISVLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKDI 61
Query: 605 ELDNAALISKMAWRLKTEPEAVWAKLIKAKYFPKTD-IPGPAKNHHSWNWKTIRKQYNII 663
E N AL+ K WR+ + PE++ AK+ K++YF K+D + P + S+ WK+I I+
Sbjct: 62 EAFNLALLGKQMWRMLSRPESLMAKVFKSRYFHKSDPLNAPLGSRPSFVWKSIHASQEIL 121
Query: 664 SELTTWEVNSGKEVNIWSDNWIPELDGAV----------HNVSNSPLTKVAQLI--TNNN 711
+ V +G+++ IW W+ + S S + KV+ LI +
Sbjct: 122 RQGARAVVGNGEDIIIWRHKWLDSKPASAALRMQRVPPQEYASVSSILKVSDLIDESGRE 181
Query: 712 WNEEMLRENFEPHTQELI 729
W ++++ F ++LI
Sbjct: 182 WRKDVIEMLFPEVERKLI 199