BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000076.1_g0810.1
(810 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G42920.2 | THO complex%2C subunit 5 | Chr5:17206310-17209522 ... 911 0.0
AT5G42920.1 | THO complex%2C subunit 5 | Chr5:17206310-17209106 ... 790 0.0
AT1G45233.2 | THO complex%2C subunit 5 | Chr1:17152956-17154662 ... 541 0.0
>AT5G42920.2 | THO complex%2C subunit 5 | Chr5:17206310-17209522
REVERSE LENGTH=819 | 201606
Length = 819
Score = 911 bits (2355), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/799 (60%), Positives = 609/799 (76%), Gaps = 11/799 (1%)
Query: 13 PPEARKIEKTAYELLEESRTSMEEIVAKMLFIKKEGRPKSELSELITQMSLHLVNLRQAN 72
PP R+ K+ ELL ES+TS+EEIVAKML +KK+G KSE+ EL+TQM L+ VNLRQAN
Sbjct: 29 PP--REPGKSPLELLRESKTSVEEIVAKMLSMKKQGNHKSEIRELLTQMFLNFVNLRQAN 86
Query: 73 RSILLEEDRVKAETERAKAPVDFTTLQLHNLMYEKNHYVKAIKACKDFKSKYPDIELVPE 132
R+IL EED+VKAETERAKAPVDFTTLQLHNLMYEK+HYVKAIKAC+DFKSKYPDI+LVPE
Sbjct: 87 RAILTEEDKVKAETERAKAPVDFTTLQLHNLMYEKSHYVKAIKACRDFKSKYPDIDLVPE 146
Query: 133 EEFFSSAPEEIKQKAMSTDNTHDLMLKRLNFEFFQRKELCKLHEKLEQHKKGLLETIANR 192
++FF APE IK +++S+D++H LM KRLNFE QRKELCK +LEQ KK LLETIA R
Sbjct: 147 QDFFRHAPEAIKDQSLSSDSSHVLMPKRLNFELHQRKELCKHRARLEQQKKSLLETIAER 206
Query: 193 KKFLSSLPSHLKTLKKASLPVQQQLGILHTKKLKQQHSAELLPPPLYVIYSQFLAQKEAF 252
KKFLSSLP HLK+LKKASLPVQ LGI HTKKLKQ + AELLPPPLYV+YSQ LAQKEAF
Sbjct: 207 KKFLSSLPLHLKSLKKASLPVQNHLGIQHTKKLKQHNLAELLPPPLYVLYSQLLAQKEAF 266
Query: 253 GENIDLEIIGSMKDAQSFAQQQARKDTGISTNSDTTKLDDDAPDDEDDGQRRRKRTKKVP 312
E+I+LE++GS+KDAQ++A+QQ+RKD+G+S+N+++++L+DD PDD+DDGQRRRKR KK+
Sbjct: 267 EESIELEVVGSLKDAQAYARQQSRKDSGMSSNTESSRLEDDGPDDDDDGQRRRKRPKKLT 326
Query: 313 SKENLDQAGIYQSHPLRIILHIYDDDDSNPKPAKLVTLRFEYLLKLNVVCVGLEGSREGP 372
SKE D+AG+YQ HPL+I+LHIYDD+ + K KLV L+FEYLLKLNVVCVG EGS++GP
Sbjct: 327 SKEGSDKAGLYQVHPLKIVLHIYDDEIPDTKSLKLVILKFEYLLKLNVVCVGAEGSQDGP 386
Query: 373 ENNILCNLFPDDTGAEFPHQLSKSCAGDA-VFDEKRTLRPYKWAQHLAGIDFLPDVSPLL 431
E NI CNLFPDD G E PHQ +K GD FDE RT RPYKW QHLAGI D+SP+L
Sbjct: 387 EKNIFCNLFPDDAGLEPPHQSTKLILGDGQTFDENRTSRPYKWVQHLAGI----DISPVL 442
Query: 432 TADKTQTNEAVKIATVTSGLSLYRQQNRVQTVVQRIRSREKAQLALAEQLDSLMKRKWPS 491
+ + K T LSLYRQQ+RVQTV++RIR R+KA LALAEQLD LMK + P
Sbjct: 443 LGQEAHNTDPAKSDTFVPDLSLYRQQHRVQTVLRRIRLRKKAHLALAEQLDLLMKHELPV 502
Query: 492 LTYNDVPWALHTRSYNLQSWSRIGASVNPTSSLSVVATEQLADLMDLDVDGRGGRSKEEL 551
+ D PWALH L SW I +S + + SL++ + EQ+ + M++DVDGR KE+
Sbjct: 503 VNCEDAPWALHKVLCALDSWLHIQSSASKSCSLTLNSVEQVPEPMEIDVDGRSISGKEDF 562
Query: 552 ESAREDGELPSILQVPAIVNDDMKVTPSKGSNLEHSRSLALISKSMTPPSKMGKSQSFVR 611
ES REDGELPS++ A + TPSK SN SR LAL++K++ P GKS SF +
Sbjct: 563 ESIREDGELPSLVTAAASLTSSNH-TPSKVSNQARSRQLALMTKNLDSPISKGKSPSFKK 621
Query: 612 HDDDMELIPESESDLDE-SARIEPEMDKLAIHELVDKSWEEYGVQEFLLVLSRRMDKDGK 670
++DD++L+ + +S++DE + R E +++L E D SW +YG +EF LV SR+ D GK
Sbjct: 622 YEDDLDLVLDDDSEIDEPTGRTEAHVEELCP-EKADNSWVDYGSREFALVFSRKTD-GGK 679
Query: 671 TVNLEAKIKISMEYPLRPPLFTLSLNQTLSEENSSKRDAAEWYNELRSMEAEVNLHILKI 730
LEA ++ISMEYPLRPPLF+LSL+ + S N + + ++ YNELR+MEAEVNLH+LKI
Sbjct: 680 LWKLEAMVQISMEYPLRPPLFSLSLHASSSSGNENGTNESDHYNELRAMEAEVNLHMLKI 739
Query: 731 LPWEYENYILAHQVCFLAMLFDFYLMEASPSSKTRKSTSVVDVGMCKPASGSILSRSFRG 790
+P + ENY+L+HQ+ LAMLFD+Y+ + SP SK +T+VVDVG+CKP G +L RSFRG
Sbjct: 740 IPSDQENYLLSHQIRCLAMLFDYYVDDPSPDSKRGTATTVVDVGLCKPVDGKLLVRSFRG 799
Query: 791 RDRRKMISWKDVECTPGYP 809
RD RKMISWK C GYP
Sbjct: 800 RDHRKMISWKGRGCASGYP 818
>AT5G42920.1 | THO complex%2C subunit 5 | Chr5:17206310-17209106
REVERSE LENGTH=702 | 201606
Length = 702
Score = 790 bits (2040), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/708 (59%), Positives = 532/708 (75%), Gaps = 9/708 (1%)
Query: 104 MYEKNHYVKAIKACKDFKSKYPDIELVPEEEFFSSAPEEIKQKAMSTDNTHDLMLKRLNF 163
MYEK+HYVKAIKAC+DFKSKYPDI+LVPE++FF APE IK +++S+D++H LM KRLNF
Sbjct: 1 MYEKSHYVKAIKACRDFKSKYPDIDLVPEQDFFRHAPEAIKDQSLSSDSSHVLMPKRLNF 60
Query: 164 EFFQRKELCKLHEKLEQHKKGLLETIANRKKFLSSLPSHLKTLKKASLPVQQQLGILHTK 223
E QRKELCK +LEQ KK LLETIA RKKFLSSLP HLK+LKKASLPVQ LGI HTK
Sbjct: 61 ELHQRKELCKHRARLEQQKKSLLETIAERKKFLSSLPLHLKSLKKASLPVQNHLGIQHTK 120
Query: 224 KLKQQHSAELLPPPLYVIYSQFLAQKEAFGENIDLEIIGSMKDAQSFAQQQARKDTGIST 283
KLKQ + AELLPPPLYV+YSQ LAQKEAF E+I+LE++GS+KDAQ++A+QQ+RKD+G+S+
Sbjct: 121 KLKQHNLAELLPPPLYVLYSQLLAQKEAFEESIELEVVGSLKDAQAYARQQSRKDSGMSS 180
Query: 284 NSDTTKLDDDAPDDEDDGQRRRKRTKKVPSKENLDQAGIYQSHPLRIILHIYDDDDSNPK 343
N+++++L+DD PDD+DDGQRRRKR KK+ SKE D+AG+YQ HPL+I+LHIYDD+ + K
Sbjct: 181 NTESSRLEDDGPDDDDDGQRRRKRPKKLTSKEGSDKAGLYQVHPLKIVLHIYDDEIPDTK 240
Query: 344 PAKLVTLRFEYLLKLNVVCVGLEGSREGPENNILCNLFPDDTGAEFPHQLSKSCAGDA-V 402
KLV L+FEYLLKLNVVCVG EGS++GPE NI CNLFPDD G E PHQ +K GD
Sbjct: 241 SLKLVILKFEYLLKLNVVCVGAEGSQDGPEKNIFCNLFPDDAGLEPPHQSTKLILGDGQT 300
Query: 403 FDEKRTLRPYKWAQHLAGIDFLPDVSPLLTADKTQTNEAVKIATVTSGLSLYRQQNRVQT 462
FDE RT RPYKW QHLAGI D+SP+L + + K T LSLYRQQ+RVQT
Sbjct: 301 FDENRTSRPYKWVQHLAGI----DISPVLLGQEAHNTDPAKSDTFVPDLSLYRQQHRVQT 356
Query: 463 VVQRIRSREKAQLALAEQLDSLMKRKWPSLTYNDVPWALHTRSYNLQSWSRIGASVNPTS 522
V++RIR R+KA LALAEQLD LMK + P + D PWALH L SW I +S + +
Sbjct: 357 VLRRIRLRKKAHLALAEQLDLLMKHELPVVNCEDAPWALHKVLCALDSWLHIQSSASKSC 416
Query: 523 SLSVVATEQLADLMDLDVDGRGGRSKEELESAREDGELPSILQVPAIVNDDMKVTPSKGS 582
SL++ + EQ+ + M++DVDGR KE+ ES REDGELPS++ A + TPSK S
Sbjct: 417 SLTLNSVEQVPEPMEIDVDGRSISGKEDFESIREDGELPSLVTAAASLTSSNH-TPSKVS 475
Query: 583 NLEHSRSLALISKSMTPPSKMGKSQSFVRHDDDMELIPESESDLDE-SARIEPEMDKLAI 641
N SR LAL++K++ P GKS SF +++DD++L+ + +S++DE + R E +++L
Sbjct: 476 NQARSRQLALMTKNLDSPISKGKSPSFKKYEDDLDLVLDDDSEIDEPTGRTEAHVEELCP 535
Query: 642 HELVDKSWEEYGVQEFLLVLSRRMDKDGKTVNLEAKIKISMEYPLRPPLFTLSLNQTLSE 701
E D SW +YG +EF LV SR+ D GK LEA ++ISMEYPLRPPLF+LSL+ + S
Sbjct: 536 -EKADNSWVDYGSREFALVFSRKTD-GGKLWKLEAMVQISMEYPLRPPLFSLSLHASSSS 593
Query: 702 ENSSKRDAAEWYNELRSMEAEVNLHILKILPWEYENYILAHQVCFLAMLFDFYLMEASPS 761
N + + ++ YNELR+MEAEVNLH+LKI+P + ENY+L+HQ+ LAMLFD+Y+ + SP
Sbjct: 594 GNENGTNESDHYNELRAMEAEVNLHMLKIIPSDQENYLLSHQIRCLAMLFDYYVDDPSPD 653
Query: 762 SKTRKSTSVVDVGMCKPASGSILSRSFRGRDRRKMISWKDVECTPGYP 809
SK +T+VVDVG+CKP G +L RSFRGRD RKMISWK C GYP
Sbjct: 654 SKRGTATTVVDVGLCKPVDGKLLVRSFRGRDHRKMISWKGRGCASGYP 701
>AT1G45233.2 | THO complex%2C subunit 5 | Chr1:17152956-17154662
FORWARD LENGTH=452 | 201606
Length = 452
Score = 541 bits (1393), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 273/460 (59%), Positives = 350/460 (76%), Gaps = 22/460 (4%)
Query: 20 EKTAYELLEESRTSMEEIVAKMLFIKKEGRPKSELSELITQMSLHLVNLRQANRSILLEE 79
EK+ ELL++++ S+E I+AKML IK++G PKSE EL+TQM L+ +NLRQANRSIL+EE
Sbjct: 14 EKSPLELLQQTKASVEAIIAKMLSIKQQGTPKSENRELLTQMFLNFINLRQANRSILIEE 73
Query: 80 DRVKAETERAKAPVDFTTLQLHNLMYEKNHYVKAIKACKDFKSKYPDIELVPEEEFFSSA 139
++V+ ETE AK+PVDFTTL+LHNLMYEK+HY+KA KA +DFKS+YP+I+L+ E++FFS A
Sbjct: 74 EKVRTETEIAKSPVDFTTLELHNLMYEKSHYLKANKASRDFKSRYPNIDLISEQDFFSDA 133
Query: 140 PEEIKQKAMSTDNTHDLMLKRLNFEFFQRKELCKLHEKLEQHKKGLLETIANRKKFLSSL 199
PE IK + +S D++HDLMLKRLNFE QRKELCKL +LEQ KK LLE+ A R KFLSSL
Sbjct: 134 PEAIKSQTLSNDSSHDLMLKRLNFELHQRKELCKLRVRLEQQKKSLLESNAERNKFLSSL 193
Query: 200 PSHLKTLKKASLPVQQQLGILHTKKLKQQHSAELLPPPLYVIYSQFLAQKEAFGENIDLE 259
P HLK+LKKASLPVQ QL + + KKLK + AELLPPPLYVIYSQF+A KEAF ENID+E
Sbjct: 194 PVHLKSLKKASLPVQSQLSLQNQKKLKYHNLAELLPPPLYVIYSQFMALKEAFEENIDVE 253
Query: 260 IIGSMKDAQSFAQQQARKDTGISTNSDTTKLDDDAPDDEDDGQRRRKRTKKVPSKENLDQ 319
+ GS+KDAQ++A+QQA + NS++ +L+ D +R+RKR KKV S D+
Sbjct: 254 VSGSLKDAQTYARQQAEQ------NSESLRLEVGV-----DEERQRKRLKKVGS----DE 298
Query: 320 AGIYQSHPLRIILHIYDDDDSNPKPAKLVTLRFEYLLKLNVVCVGLEGSREGPENNILCN 379
G+YQ HPL+++LH+YDD+ ++PK +LV L+FEYLLKLNVVCVG+E S +G E NILCN
Sbjct: 299 GGVYQVHPLKVVLHVYDDEITDPKSHELVMLKFEYLLKLNVVCVGIEESEDGLEKNILCN 358
Query: 380 LFPDDTGAEFPHQLSKSCAG-DAVFDEKRTLRPYKWAQHLAGIDFLPDVSPLLTADKTQT 438
LFPDD+G E PHQ +K G D VFD+ RT RPYKWAQHLAGI+ LP++SP T Q
Sbjct: 359 LFPDDSGLEPPHQSAKLILGNDHVFDKSRTSRPYKWAQHLAGIETLPEMSPFFTDKDIQY 418
Query: 439 NEAVKIATVTSGLSLYRQQNRVQTVVQRIRSREKAQLALA 478
++ K G + VQTV+QRIRS++K +L L
Sbjct: 419 SDTAK------GYASASDHRNVQTVLQRIRSQKKTKLTLV 452