BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000076.1_g0920.1
(188 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G16250.1 | transmembrane protein | Chr5:5310264-5310815 REVER... 241 6e-82
AT3G02640.1 | transmembrane protein | Chr3:565064-565621 REVERSE... 235 1e-79
AT5G36800.1 | transmembrane protein | Chr5:14484791-14485342 REV... 210 9e-70
AT5G36710.1 | transmembrane protein | Chr5:14425491-14426042 REV... 210 9e-70
AT5G36800.2 | transmembrane protein | Chr5:14484791-14485447 REV... 211 1e-69
>AT5G16250.1 | transmembrane protein | Chr5:5310264-5310815 REVERSE
LENGTH=183 | 201606
Length = 183
Score = 241 bits (614), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 127/180 (70%), Positives = 142/180 (78%), Gaps = 2/180 (1%)
Query: 9 SSSSVTESHYRTHKIFLLCNYILLGAASSCIFLTLSLRLIPSLPGFFLILLHILTIAAAI 68
SSS V ESHY THKIFL NYILLGAASSCIFLTLSLRLIPS+ GF LILLH TIAAA+
Sbjct: 6 SSSPVEESHYHTHKIFLFSNYILLGAASSCIFLTLSLRLIPSICGFLLILLHATTIAAAV 65
Query: 69 TGCAVASGNNTKWYATHMVATVLTAIFQGAVSVCIFTRTGDFLAELNSYVREEDGSMILK 128
+GCA AS +WYA HMVATVLTAIFQG+VSV IFT T FL L SYVREED ++ILK
Sbjct: 66 SGCAAASCGRNRWYAAHMVATVLTAIFQGSVSVLIFTNTSKFLGSLKSYVREEDAAVILK 125
Query: 129 LAGGLSITVFCLEWVVLSLAFALRYYAYVEGNDGNSSSMKRSAKVQQAEDMNDWPWPFQV 188
L GGL I +FCL+W+VL AF L+YYAYV+G DG +MKR+ KVQ E+ DWPWPFQV
Sbjct: 126 LGGGLCIVIFCLDWIVLVCAFFLKYYAYVDGGDG--VAMKRTGKVQSEENPKDWPWPFQV 183
>AT3G02640.1 | transmembrane protein | Chr3:565064-565621 REVERSE
LENGTH=185 | 201606
Length = 185
Score = 235 bits (600), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 122/179 (68%), Positives = 143/179 (79%), Gaps = 1/179 (0%)
Query: 10 SSSVTESHYRTHKIFLLCNYILLGAASSCIFLTLSLRLIPSLPGFFLILLHILTIAAAIT 69
S+ ESHY THK+FL NY+LLGA+SSCIFLTLSLRLIPSL GFFLILLH TIAAA++
Sbjct: 8 QESIQESHYYTHKLFLTANYVLLGASSSCIFLTLSLRLIPSLCGFFLILLHATTIAAAVS 67
Query: 70 GCAVASGNNTKWYATHMVATVLTAIFQGAVSVCIFTRTGDFLAELNSYVREEDGSMILKL 129
GCA AS +WYA HM+ATVLTAIFQG+VSV IFT T +FL LNSYVRE++ SMILKL
Sbjct: 68 GCAAASYGKNRWYAAHMIATVLTAIFQGSVSVLIFTNTSNFLESLNSYVREKEASMILKL 127
Query: 130 AGGLSITVFCLEWVVLSLAFALRYYAYVEGNDGNSSSMKRSAKVQQAEDMNDWPWPFQV 188
AGGL + +FCLEW+VL LAF L+YYAYV+G D N +MKR+ KVQ E + + PW FQV
Sbjct: 128 AGGLCVVIFCLEWIVLVLAFFLKYYAYVDG-DNNGVAMKRTGKVQSEETLKNSPWAFQV 185
>AT5G36800.1 | transmembrane protein | Chr5:14484791-14485342
REVERSE LENGTH=183 | 201606
Length = 183
Score = 210 bits (535), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 107/184 (58%), Positives = 137/184 (74%), Gaps = 13/184 (7%)
Query: 13 VTESHYRTHKIFLLCNYILLGAASSCIFLTLSLRLIPSLPGFFLILLHILTIAAAITGCA 72
+++S TH IFLLCNYILLG+ASSCIFLT+SLRL PSL G LI L+ LTIA A++GC+
Sbjct: 3 MSKSKGNTHNIFLLCNYILLGSASSCIFLTISLRLFPSLSGLSLIFLYTLTIATAVSGCS 62
Query: 73 VASGNNT-----KWYATHMVATVLTAIFQGAVSVCIFTRTGDFLAELNSYVREEDGSMIL 127
+ + + + + Y +HMVATVLTAIFQGAVSV IFTRTGDFL L SYVREEDG +IL
Sbjct: 63 IFASSTSATASDRLYGSHMVATVLTAIFQGAVSVLIFTRTGDFLRFLKSYVREEDGEVIL 122
Query: 128 KLAGGLSITVFCLEWVVLSLAFALRYYAYVEGN--DGNSSSMKRSAKVQQAEDMNDWP-W 184
KL+GGL + +FCLEW+VL LAF L+Y Y++ + D + ++R Q ED+ DWP +
Sbjct: 123 KLSGGLCVLMFCLEWIVLVLAFLLKYSDYLDESVVDDDDFKVRR-----QEEDLKDWPSY 177
Query: 185 PFQV 188
PFQ+
Sbjct: 178 PFQL 181
>AT5G36710.1 | transmembrane protein | Chr5:14425491-14426042
REVERSE LENGTH=183 | 201606
Length = 183
Score = 210 bits (535), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 107/184 (58%), Positives = 137/184 (74%), Gaps = 13/184 (7%)
Query: 13 VTESHYRTHKIFLLCNYILLGAASSCIFLTLSLRLIPSLPGFFLILLHILTIAAAITGCA 72
+++S TH IFLLCNYILLG+ASSCIFLT+SLRL PSL G LI L+ LTIA A++GC+
Sbjct: 3 MSKSKGNTHNIFLLCNYILLGSASSCIFLTISLRLFPSLSGLSLIFLYTLTIATAVSGCS 62
Query: 73 VASGNNT-----KWYATHMVATVLTAIFQGAVSVCIFTRTGDFLAELNSYVREEDGSMIL 127
+ + + + + Y +HMVATVLTAIFQGAVSV IFTRTGDFL L SYVREEDG +IL
Sbjct: 63 IFASSTSATASDRLYGSHMVATVLTAIFQGAVSVLIFTRTGDFLRFLKSYVREEDGEVIL 122
Query: 128 KLAGGLSITVFCLEWVVLSLAFALRYYAYVEGN--DGNSSSMKRSAKVQQAEDMNDWP-W 184
KL+GGL + +FCLEW+VL LAF L+Y Y++ + D + ++R Q ED+ DWP +
Sbjct: 123 KLSGGLCVLMFCLEWIVLVLAFLLKYSDYLDESVVDDDDFKVRR-----QEEDLKDWPSY 177
Query: 185 PFQV 188
PFQ+
Sbjct: 178 PFQL 181
>AT5G36800.2 | transmembrane protein | Chr5:14484791-14485447
REVERSE LENGTH=218 | 201606
Length = 218
Score = 211 bits (537), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 107/184 (58%), Positives = 137/184 (74%), Gaps = 13/184 (7%)
Query: 13 VTESHYRTHKIFLLCNYILLGAASSCIFLTLSLRLIPSLPGFFLILLHILTIAAAITGCA 72
+++S TH IFLLCNYILLG+ASSCIFLT+SLRL PSL G LI L+ LTIA A++GC+
Sbjct: 38 MSKSKGNTHNIFLLCNYILLGSASSCIFLTISLRLFPSLSGLSLIFLYTLTIATAVSGCS 97
Query: 73 VASGNNT-----KWYATHMVATVLTAIFQGAVSVCIFTRTGDFLAELNSYVREEDGSMIL 127
+ + + + + Y +HMVATVLTAIFQGAVSV IFTRTGDFL L SYVREEDG +IL
Sbjct: 98 IFASSTSATASDRLYGSHMVATVLTAIFQGAVSVLIFTRTGDFLRFLKSYVREEDGEVIL 157
Query: 128 KLAGGLSITVFCLEWVVLSLAFALRYYAYVEGN--DGNSSSMKRSAKVQQAEDMNDWP-W 184
KL+GGL + +FCLEW+VL LAF L+Y Y++ + D + ++R Q ED+ DWP +
Sbjct: 158 KLSGGLCVLMFCLEWIVLVLAFLLKYSDYLDESVVDDDDFKVRR-----QEEDLKDWPSY 212
Query: 185 PFQV 188
PFQ+
Sbjct: 213 PFQL 216