BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000076.1_g0940.1
(302 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G25520.3 | ribosomal protein L5 | Chr3:9269573-9271174 REVERS... 515 0.0
AT3G25520.1 | ribosomal protein L5 | Chr3:9269573-9271327 REVERS... 515 0.0
AT5G39740.2 | ribosomal protein L5 B | Chr5:15903484-15905185 FO... 511 0.0
AT5G39740.1 | ribosomal protein L5 B | Chr5:15903365-15905185 FO... 511 0.0
AT3G25520.2 | ribosomal protein L5 | Chr3:9269573-9270434 REVERS... 314 e-109
>AT3G25520.3 | ribosomal protein L5 | Chr3:9269573-9271174 REVERSE
LENGTH=301 | 201606
Length = 301
Score = 515 bits (1327), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 247/292 (84%), Positives = 267/292 (91%)
Query: 1 MAFVKAQKSRAYFKRFQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
M FVK+ KS AYFKR+QVKF+RRR+GKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI
Sbjct: 1 MVFVKSTKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
Query: 61 IAQIISATITGDMVLASAYAHELPGYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYE 120
+AQI+SA+I GD+V ASAYAHELP YGL VGLTNYAAAYCTGLLLARRVLK LEMDDEYE
Sbjct: 61 VAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYE 120
Query: 121 GNVEATGEDFSVEPTESRRPFRALLDVGLLRTTTGNRVFGALKGALDGGLDIPHSEKRFA 180
GNVEATGEDFSVEPT+SRRPFRALLDVGL+RTTTGNRVFGALKGALDGGLDIPHS+KRFA
Sbjct: 121 GNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFA 180
Query: 181 GFKKDDKQLDAELHRKYIYGGHVAAYMGTLMEDEPEKYQTHFSQYVKKGVDAEGIETLYK 240
GF K++KQLDAE+HR YIYGGHV+ YM L EDEPEK QTHFS Y+KKGV+AE IE LYK
Sbjct: 181 GFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEELYK 240
Query: 241 KVHAAIRADPTPKKSEKEQPKQHKRYNLKKLTYDERKNKLIERLNALNSAAG 292
KVHAAIRADP PKK+ K PKQHKRYNLKKLTY+ERKNKLIER+ ALN A G
Sbjct: 241 KVHAAIRADPNPKKTVKPAPKQHKRYNLKKLTYEERKNKLIERVKALNGAGG 292
>AT3G25520.1 | ribosomal protein L5 | Chr3:9269573-9271327 REVERSE
LENGTH=301 | 201606
Length = 301
Score = 515 bits (1327), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 247/292 (84%), Positives = 267/292 (91%)
Query: 1 MAFVKAQKSRAYFKRFQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
M FVK+ KS AYFKR+QVKF+RRR+GKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI
Sbjct: 1 MVFVKSTKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
Query: 61 IAQIISATITGDMVLASAYAHELPGYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYE 120
+AQI+SA+I GD+V ASAYAHELP YGL VGLTNYAAAYCTGLLLARRVLK LEMDDEYE
Sbjct: 61 VAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYE 120
Query: 121 GNVEATGEDFSVEPTESRRPFRALLDVGLLRTTTGNRVFGALKGALDGGLDIPHSEKRFA 180
GNVEATGEDFSVEPT+SRRPFRALLDVGL+RTTTGNRVFGALKGALDGGLDIPHS+KRFA
Sbjct: 121 GNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFA 180
Query: 181 GFKKDDKQLDAELHRKYIYGGHVAAYMGTLMEDEPEKYQTHFSQYVKKGVDAEGIETLYK 240
GF K++KQLDAE+HR YIYGGHV+ YM L EDEPEK QTHFS Y+KKGV+AE IE LYK
Sbjct: 181 GFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEELYK 240
Query: 241 KVHAAIRADPTPKKSEKEQPKQHKRYNLKKLTYDERKNKLIERLNALNSAAG 292
KVHAAIRADP PKK+ K PKQHKRYNLKKLTY+ERKNKLIER+ ALN A G
Sbjct: 241 KVHAAIRADPNPKKTVKPAPKQHKRYNLKKLTYEERKNKLIERVKALNGAGG 292
>AT5G39740.2 | ribosomal protein L5 B | Chr5:15903484-15905185
FORWARD LENGTH=301 | 201606
Length = 301
Score = 511 bits (1317), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 244/292 (83%), Positives = 267/292 (91%)
Query: 1 MAFVKAQKSRAYFKRFQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
M FVK+ KS AYFKR+QVKF+RRR+GKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI
Sbjct: 1 MVFVKSSKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
Query: 61 IAQIISATITGDMVLASAYAHELPGYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYE 120
+AQI+SA+I GD+V ASAYAHELP YGL VGLTNYAAAYCTGLLLARRVLK LEMDDEYE
Sbjct: 61 VAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYE 120
Query: 121 GNVEATGEDFSVEPTESRRPFRALLDVGLLRTTTGNRVFGALKGALDGGLDIPHSEKRFA 180
GNVEATGEDFSVEPT+SRRPFRALLDVGL+RTTTGNRVFGALKGALDGGLDIPHS+KRFA
Sbjct: 121 GNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFA 180
Query: 181 GFKKDDKQLDAELHRKYIYGGHVAAYMGTLMEDEPEKYQTHFSQYVKKGVDAEGIETLYK 240
GF K++KQLDAE+HR YIYGGHV+ YM L EDEPEK QTHFS Y+KKGV+AE IE +YK
Sbjct: 181 GFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEEMYK 240
Query: 241 KVHAAIRADPTPKKSEKEQPKQHKRYNLKKLTYDERKNKLIERLNALNSAAG 292
KVHAAIRA+P KK+EK PK+HKRYNLKKLTY+ERKNKLIER+ ALN A G
Sbjct: 241 KVHAAIRAEPNHKKTEKSAPKEHKRYNLKKLTYEERKNKLIERVKALNGAGG 292
>AT5G39740.1 | ribosomal protein L5 B | Chr5:15903365-15905185
FORWARD LENGTH=301 | 201606
Length = 301
Score = 511 bits (1317), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 244/292 (83%), Positives = 267/292 (91%)
Query: 1 MAFVKAQKSRAYFKRFQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
M FVK+ KS AYFKR+QVKF+RRR+GKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI
Sbjct: 1 MVFVKSSKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
Query: 61 IAQIISATITGDMVLASAYAHELPGYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYE 120
+AQI+SA+I GD+V ASAYAHELP YGL VGLTNYAAAYCTGLLLARRVLK LEMDDEYE
Sbjct: 61 VAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYE 120
Query: 121 GNVEATGEDFSVEPTESRRPFRALLDVGLLRTTTGNRVFGALKGALDGGLDIPHSEKRFA 180
GNVEATGEDFSVEPT+SRRPFRALLDVGL+RTTTGNRVFGALKGALDGGLDIPHS+KRFA
Sbjct: 121 GNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFA 180
Query: 181 GFKKDDKQLDAELHRKYIYGGHVAAYMGTLMEDEPEKYQTHFSQYVKKGVDAEGIETLYK 240
GF K++KQLDAE+HR YIYGGHV+ YM L EDEPEK QTHFS Y+KKGV+AE IE +YK
Sbjct: 181 GFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEEMYK 240
Query: 241 KVHAAIRADPTPKKSEKEQPKQHKRYNLKKLTYDERKNKLIERLNALNSAAG 292
KVHAAIRA+P KK+EK PK+HKRYNLKKLTY+ERKNKLIER+ ALN A G
Sbjct: 241 KVHAAIRAEPNHKKTEKSAPKEHKRYNLKKLTYEERKNKLIERVKALNGAGG 292
>AT3G25520.2 | ribosomal protein L5 | Chr3:9269573-9270434 REVERSE
LENGTH=190 | 201606
Length = 190
Score = 314 bits (804), Expect = e-109, Method: Compositional matrix adjust.
Identities = 151/180 (83%), Positives = 163/180 (90%)
Query: 113 LEMDDEYEGNVEATGEDFSVEPTESRRPFRALLDVGLLRTTTGNRVFGALKGALDGGLDI 172
LEMDDEYEGNVEATGEDFSVEPT+SRRPFRALLDVGL+RTTTGNRVFGALKGALDGGLDI
Sbjct: 2 LEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDI 61
Query: 173 PHSEKRFAGFKKDDKQLDAELHRKYIYGGHVAAYMGTLMEDEPEKYQTHFSQYVKKGVDA 232
PHS+KRFAGF K++KQLDAE+HR YIYGGHV+ YM L EDEPEK QTHFS Y+KKGV+A
Sbjct: 62 PHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEA 121
Query: 233 EGIETLYKKVHAAIRADPTPKKSEKEQPKQHKRYNLKKLTYDERKNKLIERLNALNSAAG 292
E IE LYKKVHAAIRADP PKK+ K PKQHKRYNLKKLTY+ERKNKLIER+ ALN A G
Sbjct: 122 ESIEELYKKVHAAIRADPNPKKTVKPAPKQHKRYNLKKLTYEERKNKLIERVKALNGAGG 181