BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000076.1_g1020.1
(211 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 173 1e-49
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 173 1e-49
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 44 2e-05
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 173 bits (439), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 121/175 (69%), Gaps = 5/175 (2%)
Query: 14 KWHTEVEGVNYHGTFAPVAKLVTVRVLLSLAFIQGWSLHQLDVNNVFLQGDLEEEVYMTI 73
K +T+ EG+++ TF+PV KL +V+++L+++ I ++LHQLD++N FL GDL+EE+YM +
Sbjct: 153 KGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKL 212
Query: 74 PPGFMSK-GDT----RVCRLNKSLYGLKQASGQWFPKFSSGLKAEGFSQSSPDHSLFSYF 128
PPG+ ++ GD+ VC L KS+YGLKQAS QWF KFS L GF QS DH+ F
Sbjct: 213 PPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKI 272
Query: 129 NGLTAIYTFVYVDDIIITDNDNKEIDSLRQRLEKRFSLKNFGRLQYFLGLEVSRS 183
+ VYVDDIII N++ +D L+ +L+ F L++ G L+YFLGLE++RS
Sbjct: 273 TATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARS 327
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 173 bits (439), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 121/175 (69%), Gaps = 5/175 (2%)
Query: 14 KWHTEVEGVNYHGTFAPVAKLVTVRVLLSLAFIQGWSLHQLDVNNVFLQGDLEEEVYMTI 73
K +T+ EG+++ TF+PV KL +V+++L+++ I ++LHQLD++N FL GDL+EE+YM +
Sbjct: 153 KGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKL 212
Query: 74 PPGFMSK-GDT----RVCRLNKSLYGLKQASGQWFPKFSSGLKAEGFSQSSPDHSLFSYF 128
PPG+ ++ GD+ VC L KS+YGLKQAS QWF KFS L GF QS DH+ F
Sbjct: 213 PPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKI 272
Query: 129 NGLTAIYTFVYVDDIIITDNDNKEIDSLRQRLEKRFSLKNFGRLQYFLGLEVSRS 183
+ VYVDDIII N++ +D L+ +L+ F L++ G L+YFLGLE++RS
Sbjct: 273 TATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARS 327
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 32/47 (68%)
Query: 134 IYTFVYVDDIIITDNDNKEIDSLRQRLEKRFSLKNFGRLQYFLGLEV 180
+Y +YVDDI++T + N ++ L +L FS+K+ G + YFLG+++
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI 47