BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000076.1_g1050.1
(248 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 196 5e-57
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 196 5e-57
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 132 1e-37
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 77 8e-18
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 196 bits (497), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 122/181 (67%)
Query: 17 DPTSFRRLIGRLLYVTITRPDIVFLLNYLSQFMQHPRSTHMDTAARVLRYLKGALDHGIL 76
D ++RRLIGRL+Y+ ITR DI F +N LSQF + PR H ++L Y+KG + G+
Sbjct: 374 DAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLF 433
Query: 77 LSSSSSLTLSSFTGSDWVRYPITSRSTTGYFTMLGASPLSWKSKKQPTVSRSSAEAEYRA 136
SS + + L F+ + + T RST GY LG S +SWKSKKQ VS+SSAEAEYRA
Sbjct: 434 YSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRA 493
Query: 137 LAFLTTQLQWLKYLFQDLRISIPEPFQVFCDNKAAMHITVNLVFHERTKHIELDCHFVRE 196
L+F T ++ WL F++L++ + +P +FCDN AA+HI N VFHERTKHIE DCH VRE
Sbjct: 494 LSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553
Query: 197 K 197
+
Sbjct: 554 R 554
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 196 bits (497), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 122/181 (67%)
Query: 17 DPTSFRRLIGRLLYVTITRPDIVFLLNYLSQFMQHPRSTHMDTAARVLRYLKGALDHGIL 76
D ++RRLIGRL+Y+ ITR DI F +N LSQF + PR H ++L Y+KG + G+
Sbjct: 374 DAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLF 433
Query: 77 LSSSSSLTLSSFTGSDWVRYPITSRSTTGYFTMLGASPLSWKSKKQPTVSRSSAEAEYRA 136
SS + + L F+ + + T RST GY LG S +SWKSKKQ VS+SSAEAEYRA
Sbjct: 434 YSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRA 493
Query: 137 LAFLTTQLQWLKYLFQDLRISIPEPFQVFCDNKAAMHITVNLVFHERTKHIELDCHFVRE 196
L+F T ++ WL F++L++ + +P +FCDN AA+HI N VFHERTKHIE DCH VRE
Sbjct: 494 LSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553
Query: 197 K 197
+
Sbjct: 554 R 554
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 132 bits (332), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 83/130 (63%)
Query: 17 DPTSFRRLIGRLLYVTITRPDIVFLLNYLSQFMQHPRSTHMDTAARVLRYLKGALDHGIL 76
DP+ FR ++G L Y+T+TRPDI + +N + Q M P D RVLRY+KG + HG+
Sbjct: 96 DPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLY 155
Query: 77 LSSSSSLTLSSFTGSDWVRYPITSRSTTGYFTMLGASPLSWKSKKQPTVSRSSAEAEYRA 136
+ +S L + +F SDW T RSTTG+ T LG + +SW +K+QPTVSRSS E EYRA
Sbjct: 156 IHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRA 215
Query: 137 LAFLTTQLQW 146
LA +L W
Sbjct: 216 LALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 77.0 bits (188), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 51/82 (62%)
Query: 29 LYVTITRPDIVFLLNYLSQFMQHPRSTHMDTAARVLRYLKGALDHGILLSSSSSLTLSSF 88
+Y+TITRPD+ F +N LSQF R+ M +VL Y+KG + G+ S++S L L +F
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60
Query: 89 TGSDWVRYPITSRSTTGYFTML 110
SDW P T RS TG+ +++
Sbjct: 61 ADSDWASCPDTRRSVTGFCSLV 82