BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000076.1_g1090.1
(394 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G36228.1 | nucleic acid binding / zinc ion binding protein | ... 63 1e-10
AT5G18636.1 | Ta11-like non-LTR retrotransposon | Chr5:6211268-6... 59 2e-09
AT3G31430.1 | zinc knuckle (CCHC-type) family protein | Chr3:127... 59 3e-09
AT5G25200.1 | Ta11-like non-LTR retrotransposon | Chr5:8716766-8... 58 5e-09
AT2G02103.1 | Ta11-like non-LTR retrotransposon | Chr2:530425-53... 58 6e-09
>AT5G36228.1 | nucleic acid binding / zinc ion binding protein |
Chr5:14271691-14272776 FORWARD LENGTH=361 | 201606
Length = 361
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 69/147 (46%), Gaps = 3/147 (2%)
Query: 77 FMIKFVTATEMEIAMESTPWVMQDELIVLQECNAATPPEDQKVDHVWFWVQLHGIPPSHL 136
F ++F + ++ + PWV + I LQ P + + + WV + GIP ++
Sbjct: 78 FQVRFRSEIDLLNGLRRAPWVFNEWFIALQRWEDF--PTEDFLTFIDVWVHIRGIPLPYV 135
Query: 137 NCTIVNRLASTMGTIIPTT-KDDASKWCLFGRIRVKMCITKAFQPRVNLKLSNNKLISIE 195
+ V +AST+G ++ ++ + F R++V+M T+ + ++ ++ + I
Sbjct: 136 SERTVEIIASTLGEVVAMDFNEETTSQITFIRVKVRMDFTEPLRFFRRVRFASRERAMIG 195
Query: 196 IRVEKLPRFCIYCGFIGHTMKFCPTIL 222
EKL R C C + H + CP ++
Sbjct: 196 FEYEKLQRVCTNCCRVNHQVSHCPYVV 222
>AT5G18636.1 | Ta11-like non-LTR retrotransposon |
Chr5:6211268-6212371 FORWARD LENGTH=367 | 201606
Length = 367
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 5/144 (3%)
Query: 79 IKFVTATEMEIAM--ESTPWVMQDELIVLQECNAATPPEDQKVDHVWFWVQLHGIPPSHL 136
++FV A E+++ M PW+ + + A P V + WVQ+ GIP ++
Sbjct: 78 VQFVFANEIDLMMVQRREPWLFNNWFVAATRWQVA--PAHNLVTTIDLWVQIRGIPLPYV 135
Query: 137 NCTIVNRLASTMGTIIPTTKDDA-SKWCLFGRIRVKMCITKAFQPRVNLKLSNNKLISIE 195
+ V +A +G II +A S F R+RV+ IT + + + + +I
Sbjct: 136 SEETVLEIAQDLGEIISLDFHEATSPQIAFIRVRVRFGITDRLRFFQRIIFDSGETATIR 195
Query: 196 IRVEKLPRFCIYCGFIGHTMKFCP 219
+ E+L R C C H +CP
Sbjct: 196 FQYERLRRLCSSCFRFTHNRAYCP 219
>AT3G31430.1 | zinc knuckle (CCHC-type) family protein |
Chr3:12795861-12796871 REVERSE LENGTH=336 | 201606
Length = 336
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 11/160 (6%)
Query: 60 LIHGPNKFTISEIRENLFMIKFVTATEMEIAMESTPWVMQDELIVLQECNAATPPEDQKV 119
L+HG I E R+ F F +E + PW D +I+LQ P+
Sbjct: 162 LVHG----RIMEGRQ--FHFIFTLEESLETVLRRGPWAFNDWMILLQRWE----PQIPLF 211
Query: 120 DHVWFWVQLHGIPPSHLNCTIVNRLASTMGTIIPTTKD-DASKWCLFGRIRVKMCITKAF 178
+ FWVQ+ GIP LN +V + +G ++ T + + F R+ + IT
Sbjct: 212 PFIPFWVQIRGIPFQFLNRGVVEHIGRALGQVLDTDFNVEVVARMDFARVLLHWDITHPL 271
Query: 179 QPRVNLKLSNNKLISIEIRVEKLPRFCIYCGFIGHTMKFC 218
+ + + + + + R E+L FC CG + H C
Sbjct: 272 RFQRHFQFTAGVNTLLRFRYERLRGFCEVCGMLTHDFGAC 311
>AT5G25200.1 | Ta11-like non-LTR retrotransposon |
Chr5:8716766-8717869 REVERSE LENGTH=367 | 201606
Length = 367
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 5/144 (3%)
Query: 79 IKFVTATEMEIAM--ESTPWVMQDELIVLQECNAATPPEDQKVDHVWFWVQLHGIPPSHL 136
++F+ A E+++ M PW+ + + A P V + WVQ+ GIP ++
Sbjct: 78 VQFLFANEIDLMMVQRREPWLFNNWFVAATRWQVA--PAHNLVTTIDLWVQIRGIPLPYV 135
Query: 137 NCTIVNRLASTMGTIIPTTKDDA-SKWCLFGRIRVKMCITKAFQPRVNLKLSNNKLISIE 195
+ V +A +G II +A S F R+RV+ IT + + + + +I
Sbjct: 136 SEETVLEIAQDLGEIISLDFHEATSPQIAFIRVRVRFGITDRLRFFQRIIFDSGETATIR 195
Query: 196 IRVEKLPRFCIYCGFIGHTMKFCP 219
+ E+L R C C H +CP
Sbjct: 196 FQYERLRRLCSSCFRFTHNRAYCP 219
>AT2G02103.1 | Ta11-like non-LTR retrotransposon |
Chr2:530425-531636 REVERSE LENGTH=403 | 201606
Length = 403
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 5/144 (3%)
Query: 79 IKFVTATEMEIAM--ESTPWVMQDELIVLQECNAATPPEDQKVDHVWFWVQLHGIPPSHL 136
++F+ A E+++ M PW+ + + A P V + WVQ+ GIP ++
Sbjct: 78 VQFLFANEIDLLMVQRREPWLFNNWFVAATRWQVA--PAHNLVTTIDLWVQIRGIPLPYV 135
Query: 137 NCTIVNRLASTMGTIIPTTKDDA-SKWCLFGRIRVKMCITKAFQPRVNLKLSNNKLISIE 195
+ V +A +G II +A S F R+RV+ IT + + + + +I
Sbjct: 136 SEETVMEIAHDLGEIISLDFHEATSPQIAFIRVRVRFGITDRLRFFQRVIFDSGETATIR 195
Query: 196 IRVEKLPRFCIYCGFIGHTMKFCP 219
+ E+L R C C H +CP
Sbjct: 196 FQYERLRRLCSSCFRFTHNRAYCP 219