BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000076.1_g1120.1
(141 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G46460.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 47 3e-07
AT1G04625.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 47 7e-07
>AT2G46460.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr2:19071537-19072019 FORWARD
LENGTH=160 | 201606
Length = 160
Score = 47.4 bits (111), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 11/139 (7%)
Query: 6 WIPPPQGKLKINVDGSH-REHIASCAAVARNWKGEVISSISRLIEPLS-PMFSEIQGLLC 63
W PP G K N DGS+ RE + + R+ G+ +S+ S + SE Q LL
Sbjct: 3 WTRPPHGWKKCNYDGSYNREMPSKAGWIIRDESGQFVSAGQATGNHTSNALESEFQALLI 62
Query: 64 GIELAAELGEEASFIEGDARVLITLI----STVDLDPPWRYINEINKIREAVRERQVALT 119
++ G + EGD R ++ ++ S D+ + +I ++ ++ +E T
Sbjct: 63 TMQSCWSHGHRKIWFEGDNREVMEILNRRKSRFDI---FNWIRDVQAWKQRFQE--CRFT 117
Query: 120 YCNRSSNVEAHNLAYSILP 138
+ NR N A LA S LP
Sbjct: 118 WINRKQNKPADILAKSHLP 136
>AT1G04625.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr1:1287831-1289820 REVERSE
LENGTH=257 | 201606
Length = 257
Score = 47.4 bits (111), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 5/140 (3%)
Query: 4 NDWIPPPQGKLKINVDGSHREHIASCAA-VARNWKGEVISSISRLIE-PLSPMFSEIQGL 61
N W PP G K N DG++ + S A + R+ +G + + + +PM SE+Q L
Sbjct: 80 NLWTTPPIGWTKCNYDGTYHSNAPSKAGWLLRDDRGTFLGAAHAIGSITTNPMESELQAL 139
Query: 62 LCGIELAAELGEEASFIEGDARVLITLISTVDLD-PPWRYINEINKIREAVRERQVALTY 120
+ ++ G + EGD + + +++ + + +I +I+ R E T+
Sbjct: 140 VMAMQHCWSRGYRKIYFEGDNKEVSEIVNGRSSNFAVFNWIRDISAWRSKFEE--CKFTW 197
Query: 121 CNRSSNVEAHNLAYSILPLD 140
R SN+ A LA LPL+
Sbjct: 198 TRRFSNMAADALAKQQLPLN 217