BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000076.1_g1150.1
(343 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G05660.1 | Pectin lyase-like superfamily protein | Chr1:16942... 308 e-103
AT2G43890.1 | Pectin lyase-like superfamily protein | Chr2:18176... 299 3e-99
AT3G59850.1 | Pectin lyase-like superfamily protein | Chr3:22109... 296 2e-98
AT3G59850.2 | Pectin lyase-like superfamily protein | Chr3:22109... 297 5e-98
AT2G43870.1 | Pectin lyase-like superfamily protein | Chr2:18166... 295 6e-98
>AT1G05660.1 | Pectin lyase-like superfamily protein |
Chr1:1694286-1696058 REVERSE LENGTH=394 | 201606
Length = 394
Score = 308 bits (789), Expect = e-103, Method: Compositional matrix adjust.
Identities = 167/396 (42%), Positives = 231/396 (58%), Gaps = 61/396 (15%)
Query: 2 ATIIYSFLFSLLFIFPFLPSSSTAYLLINVADFGATAGDGNTDSSPSFIRAWIKACTSNL 61
+ I +S LF+LL F+ S +A + NV FGA DG TDS+ +F++AW AC S
Sbjct: 4 SVIRFSLLFTLL---TFIDVSISASNVFNVVSFGAKP-DGVTDSTGAFLKAWQGACVSAS 59
Query: 62 PTTIYIPPKRYFVRPVIFQGPCTSSNITFHLDGILVAPDDYVDMGSNENWFTFTGVNGLS 121
T+ +P + ++ + F GPC S ITF + G ++AP+DY G++ W F VN S
Sbjct: 60 SATVVVPKGTFLLKVITFGGPC-KSKITFQVAGTVIAPEDYRTFGNSGFWILFNKVNRFS 118
Query: 122 IVGGGYLDGQGARLWSCKGTSSRKCPPGATSLAVYGSKDVLIRNITLIDAKLYHIVIHSC 181
+VGG + D + WSC+ S + CPPG S++ +KDV+I + +++++ H+ ++ C
Sbjct: 119 LVGGTF-DARANGFWSCR-KSGQNCPPGVRSISFNSAKDVIISGVKSMNSQVTHMTLNGC 176
Query: 182 KNVKIEGVRIYAPENSPNTDGIHIQNAV-------------------------------- 209
NV + V++ AP NSPNTDG H+Q++
Sbjct: 177 TNVVVRNVKLVAPGNSPNTDGFHVQHSTGVTFTGSTVQTGDDCVAIGPGTRNLLITKLAC 236
Query: 210 ---------------------NVRVLKTVFTGTTNGLRIKSWGRPSNGFVKGVVFKQVVM 248
NV V +VFTG+ NG+RIKSW RPSNGFV+ V F+ +VM
Sbjct: 237 GPGHGVSIGSLAKELKEDGVENVTVSSSVFTGSQNGVRIKSWARPSNGFVRTVFFQDLVM 296
Query: 249 KNVENPIVIDQNYCPWYEGCPDQNSGIKISHVTYSNIKGTSASQVAMKFDCSATSPCRGI 308
KNVENPI+IDQNYCP +EGCP++ SG+KIS VTY NI+GTSA+Q AMK CS +SPC GI
Sbjct: 297 KNVENPIIIDQNYCPTHEGCPNEYSGVKISQVTYKNIQGTSATQEAMKLVCSKSSPCTGI 356
Query: 309 GLKDIQLTYQR-QPAQSFCRNIHGIARGVITPPSCL 343
L+DI+LTY + PA SFC N G + GVI P SCL
Sbjct: 357 TLQDIKLTYNKGTPATSFCFNAVGKSLGVIQPTSCL 392
>AT2G43890.1 | Pectin lyase-like superfamily protein |
Chr2:18176924-18178390 FORWARD LENGTH=392 | 201606
Length = 392
Score = 299 bits (765), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 156/386 (40%), Positives = 224/386 (58%), Gaps = 58/386 (15%)
Query: 12 LLFIFPFL-PSSSTAYLLINVADFGATAGDGNTDSSPSFIRAWIKACTSNLPTTIYIPPK 70
L+F FL SSTA NV FGA DG TDS+ +F+ AW AC S T+ +P
Sbjct: 11 LMFFSSFLLMKSSTAASNYNVVSFGAKP-DGRTDSTKAFLGAWQAACRSAAAVTVTVPRG 69
Query: 71 RYFVRPVIFQGPCTSSNITFHLDGILVAPDDYVDMGSNENWFTFTGVNGLSIVGGGYLDG 130
+ ++PV F+GPC S ITF + G +VAP DY +G++ W F VN +SI+GG LD
Sbjct: 70 SFLLKPVEFRGPC-RSRITFQIYGTIVAPSDYRGLGNSGYWILFVKVNRISIIGG-TLDA 127
Query: 131 QGARLWSCKGTSSRKCPPGATSLAVYGSKDVLIRNITLIDAKLYHIVIHSCKNVKIEGVR 190
+GA W+C+ S + CP GA S+ + DV++ +T I+++ H+VI+SC NV + V+
Sbjct: 128 RGASFWACR-KSGKSCPVGARSMTFNWANDVVVSGLTSINSQTTHLVINSCNNVIVRKVK 186
Query: 191 IYAPENSPNTDGIHIQNAV----------------------------------------- 209
+ AP+ SPNTDG+H+Q +
Sbjct: 187 LVAPDQSPNTDGLHVQGSAGVTVTDGTFHTGDDCISIGPGTRNLYMSKLNCGPGHGISIG 246
Query: 210 ------------NVRVLKTVFTGTTNGLRIKSWGRPSNGFVKGVVFKQVVMKNVENPIVI 257
N+ ++ +VF+G+ NG+RIK+W R S GFV+ V+F+ ++MKNV+NPI++
Sbjct: 247 SLGRDANEAGVENITLINSVFSGSDNGVRIKTWARQSTGFVRNVLFQNLIMKNVQNPIIV 306
Query: 258 DQNYCPWYEGCPDQNSGIKISHVTYSNIKGTSASQVAMKFDCSATSPCRGIGLKDIQLTY 317
DQNYCP +GCP Q SG+KIS V Y NI+GTS +Q A+ FDCS ++PC+ I L DI+LT+
Sbjct: 307 DQNYCPSNQGCPKQGSGVKISQVVYRNIQGTSRTQQALTFDCSRSNPCQAIRLHDIKLTF 366
Query: 318 QRQPAQSFCRNIHGIARGVITPPSCL 343
+ A S C+NI G+ GV+ P CL
Sbjct: 367 NGRSATSTCKNIKGVKAGVVMPQGCL 392
>AT3G59850.1 | Pectin lyase-like superfamily protein |
Chr3:22109343-22111566 REVERSE LENGTH=388 | 201606
Length = 388
Score = 296 bits (758), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 154/368 (41%), Positives = 212/368 (57%), Gaps = 57/368 (15%)
Query: 30 NVADFGATAGDGNTDSSPSFIRAWIKACTSNLPTTIYIPPKRYFVRPVIFQG-PCTSSNI 88
N+ +GA DG TDS+ +F W KAC S P TI +P R+ +R +IF G C ++
Sbjct: 24 NILSYGAKP-DGKTDSTKAFTVLWAKACASVKPVTILVPKGRFLLRSIIFDGSKCKRKSV 82
Query: 89 TFHLDGILVAPDDYVDMGSNENWFTFTGVNGLSIVGGGYLDGQGARLWSCKGTSSRKCPP 148
TF + G LVAP DY +G W F ++G+S+ GG LD QGA LWSCK S + CP
Sbjct: 83 TFRIQGTLVAPSDYRVIGKENYWILFQHLDGISVYGG-VLDAQGASLWSCK-KSGKNCPS 140
Query: 149 GATSLAVYGSKDVLIRNITLIDAKLYHIVIHSCKNVKIEGVRIYAPENSPNTDGIHIQNA 208
GATS+ S++V+I +T ++++++H+ I+ C NVK++GV++ A NSPNTDGIH+Q++
Sbjct: 141 GATSIGFQSSRNVVISGLTSLNSQMFHVAINGCSNVKLDGVKVSADGNSPNTDGIHVQSS 200
Query: 209 VNVRVLKT---------------------------------------------------- 216
V +L +
Sbjct: 201 STVSILNSKISTGDDCVSIGPGTNGLWIENVACGPGHGISIGSLGKESVEVGVQNITVKT 260
Query: 217 -VFTGTTNGLRIKSWGRPSNGFVKGVVFKQVVMKNVENPIVIDQNYCPWYEGCPDQNSGI 275
FTGT NG+RIKSW RPSNGF K + F+ VM NV+NPIVIDQNYCP E CP+Q SGI
Sbjct: 261 ATFTGTENGVRIKSWARPSNGFAKNIRFQHCVMNNVQNPIVIDQNYCPGNENCPNQVSGI 320
Query: 276 KISHVTYSNIKGTSASQVAMKFDCSATSPCRGIGLKDIQLTYQRQPAQSFCRNIHGIARG 335
KIS V + +I GTSA++V +K DCS+ PC GI ++D++LTY+ +PA + C + G G
Sbjct: 321 KISDVMFFDIHGTSATEVGVKLDCSSKKPCTGIRIQDVKLTYRNKPATTDCSHAGGSEAG 380
Query: 336 VITPPSCL 343
P SCL
Sbjct: 381 FQRPNSCL 388
>AT3G59850.2 | Pectin lyase-like superfamily protein |
Chr3:22109343-22111698 REVERSE LENGTH=432 | 201606
Length = 432
Score = 297 bits (760), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 154/368 (41%), Positives = 212/368 (57%), Gaps = 57/368 (15%)
Query: 30 NVADFGATAGDGNTDSSPSFIRAWIKACTSNLPTTIYIPPKRYFVRPVIFQG-PCTSSNI 88
N+ +GA DG TDS+ +F W KAC S P TI +P R+ +R +IF G C ++
Sbjct: 68 NILSYGAKP-DGKTDSTKAFTVLWAKACASVKPVTILVPKGRFLLRSIIFDGSKCKRKSV 126
Query: 89 TFHLDGILVAPDDYVDMGSNENWFTFTGVNGLSIVGGGYLDGQGARLWSCKGTSSRKCPP 148
TF + G LVAP DY +G W F ++G+S+ GG LD QGA LWSCK S + CP
Sbjct: 127 TFRIQGTLVAPSDYRVIGKENYWILFQHLDGISVYGG-VLDAQGASLWSCK-KSGKNCPS 184
Query: 149 GATSLAVYGSKDVLIRNITLIDAKLYHIVIHSCKNVKIEGVRIYAPENSPNTDGIHIQNA 208
GATS+ S++V+I +T ++++++H+ I+ C NVK++GV++ A NSPNTDGIH+Q++
Sbjct: 185 GATSIGFQSSRNVVISGLTSLNSQMFHVAINGCSNVKLDGVKVSADGNSPNTDGIHVQSS 244
Query: 209 VNVRVLKT---------------------------------------------------- 216
V +L +
Sbjct: 245 STVSILNSKISTGDDCVSIGPGTNGLWIENVACGPGHGISIGSLGKESVEVGVQNITVKT 304
Query: 217 -VFTGTTNGLRIKSWGRPSNGFVKGVVFKQVVMKNVENPIVIDQNYCPWYEGCPDQNSGI 275
FTGT NG+RIKSW RPSNGF K + F+ VM NV+NPIVIDQNYCP E CP+Q SGI
Sbjct: 305 ATFTGTENGVRIKSWARPSNGFAKNIRFQHCVMNNVQNPIVIDQNYCPGNENCPNQVSGI 364
Query: 276 KISHVTYSNIKGTSASQVAMKFDCSATSPCRGIGLKDIQLTYQRQPAQSFCRNIHGIARG 335
KIS V + +I GTSA++V +K DCS+ PC GI ++D++LTY+ +PA + C + G G
Sbjct: 365 KISDVMFFDIHGTSATEVGVKLDCSSKKPCTGIRIQDVKLTYRNKPATTDCSHAGGSEAG 424
Query: 336 VITPPSCL 343
P SCL
Sbjct: 425 FQRPNSCL 432
>AT2G43870.1 | Pectin lyase-like superfamily protein |
Chr2:18166615-18168264 REVERSE LENGTH=384 | 201606
Length = 384
Score = 295 bits (755), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 159/389 (40%), Positives = 224/389 (57%), Gaps = 59/389 (15%)
Query: 9 LFSLLFIFPFLPSSSTAYLLINVADFGATAGDGNTDSSPSFIRAWIKACTSNLPTTIYIP 68
+ SLL +F F SS + NV FGA DG TD++ +F+ W AC S+ P TI +P
Sbjct: 1 MASLLVLFVFFFISSCSAQSYNVLSFGAKP-DGKTDATKAFMAVWQTACASSRPVTIVVP 59
Query: 69 PKRYFVRPVIFQG-PCTSSNITFHLDGILVAPDDYVDMGSNENWFTFTGVNGLSIVGGGY 127
R+ +R V F G C +TF +DG LVAP DY +G+ + W F ++G+++ GG
Sbjct: 60 KGRFLLRSVTFDGSKCKPKPVTFRIDGTLVAPADYRVIGNEDYWIFFQHLDGITVYGG-V 118
Query: 128 LDGQGARLWSCKGTSSRKCPPGATSLAVYGSKDVLIRNITLIDAKLYHIVIHSCKNVKIE 187
LD +GA LW CK S + CP GAT++ S +V++ +T ++++++H+VI+ C NVK++
Sbjct: 119 LDARGASLWDCK-KSGKNCPSGATTIGFQSSSNVVVSGLTSLNSQMFHVVINGCNNVKLQ 177
Query: 188 GVRIYAPENSPNTDGIHIQNAVNVRVLKT------------------------------- 216
GV++ A NSPNTDGIH+Q++ +V + T
Sbjct: 178 GVKVLAAGNSPNTDGIHVQSSSSVSIFNTKISTGDDCVSIGPGTNGLWIENVACGPGHGI 237
Query: 217 ----------------------VFTGTTNGLRIKSWGRPSNGFVKGVVFKQVVMKNVENP 254
FTGT NG+RIKSW RPS+GF K + F+ VM NVENP
Sbjct: 238 SIGSLGKDSVESGVQNVTVKTVTFTGTDNGVRIKSWARPSSGFAKNIRFQHCVMNNVENP 297
Query: 255 IVIDQNYCPWYEGCPDQNSGIKISHVTYSNIKGTSASQVAMKFDCSATSPCRGIGLKDIQ 314
I+IDQNYCP ++ CP Q SGIKIS V + +I GTSA++V +K DCS+ PC GI L+D++
Sbjct: 298 IIIDQNYCPDHD-CPRQVSGIKISDVLFVDIHGTSATEVGVKLDCSSKKPCTGIRLEDVK 356
Query: 315 LTYQRQPAQSFCRNIHGIARGVITPPSCL 343
LTYQ +PA S C + GI G P+CL
Sbjct: 357 LTYQNKPAASACTHAGGIEAGFFQ-PNCL 384