BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000076.1_g1180.1
(119 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G38530.1 | lipid transfer protein 2 | Chr2:16128481-16128948 ... 109 7e-32
AT2G38540.1 | lipid transfer protein 1 | Chr2:16130418-16130893 ... 105 3e-30
AT3G51590.1 | lipid transfer protein 12 | Chr3:19135828-19136654... 101 7e-29
AT5G59310.1 | lipid transfer protein 4 | Chr5:23925296-23925772 ... 99 6e-28
AT5G59320.1 | lipid transfer protein 3 | Chr5:23929051-23929492 ... 98 2e-27
>AT2G38530.1 | lipid transfer protein 2 | Chr2:16128481-16128948
FORWARD LENGTH=118 | 201606
Length = 118
Score = 109 bits (272), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 59/114 (51%), Positives = 75/114 (65%), Gaps = 2/114 (1%)
Query: 6 LKMVAVVLACMVLVAAPYEAEGAMTCGTVASKLAPCLGFLKNGGAVPGGCCGGVKALMAA 65
+K+ +VLACM+ VA P A M+CGTV LA C+ +L G + GCC GV L
Sbjct: 5 MKLACMVLACMI-VAGPITANALMSCGTVNGNLAGCIAYLTRGAPLTQGCCNGVTNLKNM 63
Query: 66 ASTTPDRKTACGCLKNAAGSI-PGIKLENAAALPSKCSVNIPYKISPSTDCSKV 118
ASTTPDR+ AC CL++AA ++ PG+ AA LPS C VNIPYKIS ST+C+ V
Sbjct: 64 ASTTPDRQQACRCLQSAAKAVGPGLNTARAAGLPSACKVNIPYKISASTNCNTV 117
>AT2G38540.1 | lipid transfer protein 1 | Chr2:16130418-16130893
FORWARD LENGTH=118 | 201606
Length = 118
Score = 105 bits (261), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 76/114 (66%), Gaps = 2/114 (1%)
Query: 6 LKMVAVVLACMVLVAAPYEAEGAMTCGTVASKLAPCLGFLKNGGAVPGGCCGGVKALMAA 65
+K+ ++LACM+ VA P + A++CG+V S LA C+G++ GG +P CC GVK L +
Sbjct: 5 MKLACLLLACMI-VAGPITSNAALSCGSVNSNLAACIGYVLQGGVIPPACCSGVKNLNSI 63
Query: 66 ASTTPDRKTACGCLKNAAGSI-PGIKLENAAALPSKCSVNIPYKISPSTDCSKV 118
A TTPDR+ AC C++ AA ++ G+ AA +P C VNIPYKIS ST+C V
Sbjct: 64 AKTTPDRQQACNCIQGAARALGSGLNAGRAAGIPKACGVNIPYKISTSTNCKTV 117
>AT3G51590.1 | lipid transfer protein 12 | Chr3:19135828-19136654
REVERSE LENGTH=119 | 201606
Length = 119
Score = 101 bits (252), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 68/112 (60%), Gaps = 2/112 (1%)
Query: 7 KMVAVVLACMVLVAAPYEAEGAMTCGTVASKLAPCLGFLKNGGAVPGGCCGGVKALMAAA 66
K++ ++ + +A+P E + CGTV S LA CL +L N G +P CC GVK+L A
Sbjct: 6 KIITCLIVLTIYMASP--TESTIQCGTVTSTLAQCLTYLTNSGPLPSQCCVGVKSLYQLA 63
Query: 67 STTPDRKTACGCLKNAAGSIPGIKLENAAALPSKCSVNIPYKISPSTDCSKV 118
TTPDRK C CLK A I G+ + AALP+ C V+IPY IS ST+C +
Sbjct: 64 QTTPDRKQVCECLKLAGKEIKGLNTDLVAALPTTCGVSIPYPISFSTNCDSI 115
>AT5G59310.1 | lipid transfer protein 4 | Chr5:23925296-23925772
REVERSE LENGTH=112 | 201606
Length = 112
Score = 99.0 bits (245), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 68/108 (62%), Gaps = 4/108 (3%)
Query: 12 VLACMVL-VAAPYEAEGAMTCGTVASKLAPCLGFLKNGGAVPGGCCGGVKALMAAASTTP 70
C VL V + A+TCGTVAS L+PCLG+L GG VP CC GVK L A TTP
Sbjct: 7 FFTCFVLTVFIVASVDAAITCGTVASSLSPCLGYLSKGGVVPPPCCAGVKKLNGMAQTTP 66
Query: 71 DRKTACGCLKNAAGSIPGIKLENAAALPSKCSVNIPYKISPSTDCSKV 118
DR+ AC CL++AA G+ A+ LP KC V+IPY IS ST+C+ +
Sbjct: 67 DRQQACRCLQSAAK---GVNPSLASGLPGKCGVSIPYPISTSTNCATI 111
>AT5G59320.1 | lipid transfer protein 3 | Chr5:23929051-23929492
FORWARD LENGTH=115 | 201606
Length = 115
Score = 98.2 bits (243), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 68/108 (62%), Gaps = 1/108 (0%)
Query: 12 VLACMVL-VAAPYEAEGAMTCGTVASKLAPCLGFLKNGGAVPGGCCGGVKALMAAASTTP 70
C+VL V + A++CGTVA LAPC +L GG VP CC GVK L + A TTP
Sbjct: 7 FFTCLVLTVCIVASVDAAISCGTVAGSLAPCATYLSKGGLVPPSCCAGVKTLNSMAKTTP 66
Query: 71 DRKTACGCLKNAAGSIPGIKLENAAALPSKCSVNIPYKISPSTDCSKV 118
DR+ AC C+++ A SI G+ A+ LP KC V+IPY IS ST+C+ +
Sbjct: 67 DRQQACRCIQSTAKSISGLNPSLASGLPGKCGVSIPYPISMSTNCNNI 114