BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000076.1_g1200.1
(110 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G46490.1 | hypothetical protein | Chr2:19079457-19079861 FORW... 80 3e-20
AT5G35110.1 | hypothetical protein | Chr5:13363937-13364275 REVE... 71 4e-17
>AT2G46490.1 | hypothetical protein | Chr2:19079457-19079861
FORWARD LENGTH=134 | 201606
Length = 134
Score = 79.7 bits (195), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 48/75 (64%), Gaps = 14/75 (18%)
Query: 6 AAEGLLRCVFEGCISTTDTEIERRPYHRNCGCALHKSTSSSCFNNKK------------- 52
AA+G+ R +FEGCIS D+ IERRPYH+NCGCALH +S + N +
Sbjct: 2 AADGIFRSIFEGCISGLDSAIERRPYHKNCGCALHDKSSGAGKNQNQRRPPSCRRHGSSE 61
Query: 53 -LSYPIRRSWSESSL 66
+S+PIRRSWSE ++
Sbjct: 62 SISFPIRRSWSEGNI 76
>AT5G35110.1 | hypothetical protein | Chr5:13363937-13364275
REVERSE LENGTH=112 | 201606
Length = 112
Score = 71.2 bits (173), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 50/71 (70%), Gaps = 8/71 (11%)
Query: 1 MATGAAAEGLLRCVFEGCISTTDTEIERRPYHRNCGCALHK-----STSSSCFNNKK--L 53
MA G+ +G+ R +FEGCIS+ D+ I+RRPYH+NCGCALH+ +++ C + + +
Sbjct: 1 MAAGSM-DGIFRNIFEGCISSCDSSIQRRPYHKNCGCALHERSRGGGSATPCRHGRSEVV 59
Query: 54 SYPIRRSWSES 64
+PI+RSWSE
Sbjct: 60 MFPIQRSWSEG 70