BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000076.1_g1210.1
(120 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G15900.1 | transmembrane protein | Chr1:5464356-5464697 FORWA... 89 6e-24
>AT1G15900.1 | transmembrane protein | Chr1:5464356-5464697 FORWARD
LENGTH=113 | 201606
Length = 113
Score = 89.0 bits (219), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 71/94 (75%)
Query: 2 ENGDDWIALDKLYHVLFCFFISVVISSLAMRTRYPFLSRWSISIGSLVSMAAGAAKEAGD 61
+ D W+A DKLYHV+FCF IS++ S+LA +RY FL R SI IGS S+AAGAAKEA D
Sbjct: 9 DGEDPWLARDKLYHVIFCFSISLIFSTLASFSRYSFLRRHSIWIGSAFSLAAGAAKEAAD 68
Query: 62 EIGLWKSAGASTKDAIADLFGILLAYLCLSFYRS 95
+IG++ SAGAS +DA+AD G+++A L L ++S
Sbjct: 69 QIGIFPSAGASVRDAVADAIGVVIAALVLLLWKS 102