BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000076.1_g1300.1
(106 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G31980.1 | PPPDE thiol peptidase family protein | Chr4:154649... 67 4e-14
AT5G11290.2 | transmembrane protein%2C putative (DUF247) | Chr5:... 59 3e-11
AT3G47210.1 | hypothetical protein (DUF247) | Chr3:17385545-1738... 51 1e-08
AT3G47200.2 | transmembrane protein%2C putative (DUF247) | Chr3:... 50 4e-08
AT3G47200.1 | transmembrane protein%2C putative (DUF247) | Chr3:... 50 4e-08
>AT4G31980.1 | PPPDE thiol peptidase family protein |
Chr4:15464905-15469204 FORWARD LENGTH=680 | 201606
Length = 680
Score = 67.0 bits (162), Expect = 4e-14, Method: Composition-based stats.
Identities = 33/60 (55%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 44 ALVDSIEAEVREAFSSRFVRECSIFRVHKKFHKMNDRAYKPEVVSIGPLHRGKLELQAME 103
ALVDSI+A++ AF S +C I++V K ++N AY P +VS GPLHRGK ELQAME
Sbjct: 274 ALVDSIKAKL--AFLSSLSTKCCIYKVPNKLRRLNPDAYTPRLVSFGPLHRGKEELQAME 331
>AT5G11290.2 | transmembrane protein%2C putative (DUF247) |
Chr5:3598959-3600227 FORWARD LENGTH=422 | 201606
Length = 422
Score = 58.9 bits (141), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/60 (53%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 44 ALVDSIEAEVREAFSSRFVRECSIFRVHKKFHKMNDRAYKPEVVSIGPLHRGKLELQAME 103
ALVDSI+ E E+ SS C I++ ++ ++N AY P VVSIGPLH GK ELQAME
Sbjct: 14 ALVDSIK-ENLESLSS-LSTNCCIYKAPERLRRLNPDAYSPRVVSIGPLHYGKEELQAME 71
>AT3G47210.1 | hypothetical protein (DUF247) |
Chr3:17385545-17386969 FORWARD LENGTH=474 | 201606
Length = 474
Score = 51.2 bits (121), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 29/40 (72%)
Query: 65 CSIFRVHKKFHKMNDRAYKPEVVSIGPLHRGKLELQAMEK 104
C IFRV K F +MN AYKP+VVSIGP H G+ L+ +++
Sbjct: 93 CCIFRVPKSFAEMNPEAYKPKVVSIGPYHHGRKHLEMIQQ 132
>AT3G47200.2 | transmembrane protein%2C putative (DUF247) |
Chr3:17377658-17379088 REVERSE LENGTH=476 | 201606
Length = 476
Score = 50.1 bits (118), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 65 CSIFRVHKKFHKMNDRAYKPEVVSIGPLHRGKLELQAMEK 104
C IFRV + F +N +AYKP+VVSIGP H G+ LQ +++
Sbjct: 46 CCIFRVPESFVALNPKAYKPKVVSIGPYHYGEKHLQMIQQ 85
>AT3G47200.1 | transmembrane protein%2C putative (DUF247) |
Chr3:17377658-17379088 REVERSE LENGTH=476 | 201606
Length = 476
Score = 50.1 bits (118), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 65 CSIFRVHKKFHKMNDRAYKPEVVSIGPLHRGKLELQAMEK 104
C IFRV + F +N +AYKP+VVSIGP H G+ LQ +++
Sbjct: 46 CCIFRVPESFVALNPKAYKPKVVSIGPYHYGEKHLQMIQQ 85