BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000076.1_g1350.1
(136 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 117 3e-31
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 117 3e-31
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 89 6e-23
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 117 bits (292), Expect = 3e-31, Method: Composition-based stats.
Identities = 54/121 (44%), Positives = 77/121 (63%)
Query: 10 YEVVDNEEELNLCCFLMDCDPISYEEAIQEEKWENAMNEEINAIEKNDTWELTNLPKGYK 69
YE V L C +P +Y EA + W AM++EI A+E TWE+ LP K
Sbjct: 66 YEKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKK 125
Query: 70 PIGVKWVYKTKKNASGEVQRYKARLVAKGYKQRAGIDYSEVFAPVARMETIRLLISSGSI 129
PIG KWVYK K N+ G ++RYKARLVAKGY Q+ GID+ E F+PV ++ +++L+++ +I
Sbjct: 126 PIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAI 185
Query: 130 F 130
+
Sbjct: 186 Y 186
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 117 bits (292), Expect = 3e-31, Method: Composition-based stats.
Identities = 54/121 (44%), Positives = 77/121 (63%)
Query: 10 YEVVDNEEELNLCCFLMDCDPISYEEAIQEEKWENAMNEEINAIEKNDTWELTNLPKGYK 69
YE V L C +P +Y EA + W AM++EI A+E TWE+ LP K
Sbjct: 66 YEKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKK 125
Query: 70 PIGVKWVYKTKKNASGEVQRYKARLVAKGYKQRAGIDYSEVFAPVARMETIRLLISSGSI 129
PIG KWVYK K N+ G ++RYKARLVAKGY Q+ GID+ E F+PV ++ +++L+++ +I
Sbjct: 126 PIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAI 185
Query: 130 F 130
+
Sbjct: 186 Y 186
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 89.0 bits (219), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 61/97 (62%)
Query: 29 DPISYEEAIQEEKWENAMNEEINAIEKNDTWELTNLPKGYKPIGVKWVYKTKKNASGEVQ 88
+P S A+++ W AM EE++A+ +N TW L P +G KWV+KTK ++ G +
Sbjct: 27 EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86
Query: 89 RYKARLVAKGYKQRAGIDYSEVFAPVARMETIRLLIS 125
R KARLVAKG+ Q GI + E ++PV R TIR +++
Sbjct: 87 RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILN 123