BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000076.1_g1360.1
(297 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 179 1e-50
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 179 1e-50
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 152 1e-44
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 71 4e-15
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 179 bits (455), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 90/246 (36%), Positives = 140/246 (56%)
Query: 5 FDMTDIGLMGHFLGTEVKQMENGIFISQRGYAKEVLKRFKMESCNPVNTPLESGVVLRKC 64
F + D+G + +FLG E+ + GI I QR YA ++L + C P + P++ V
Sbjct: 308 FKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAH 367
Query: 65 TRRSDVDPTYFESLIGSLRYLTCTRPDILYGVGLVSRYMDTPDESHLNVAKRLLRYVKGT 124
+ VD + LIG L YL TR DI + V +S++ + P +H ++L Y+KGT
Sbjct: 368 SGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGT 427
Query: 125 LNNGLFFTCEQDFKLIGYSDSDWGRDLDERKSTSGFVFFMGYTAFTWSSKKQPIVTLSTC 184
+ GLF++ + + +L +SD+ + D R+ST+G+ F+G + +W SKKQ +V+ S+
Sbjct: 428 VGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSA 487
Query: 185 EAEYVAASSMVCHAIWLRNMLKHLQCPQVGPTEVFLDNKSAIALAKNPVCHERSKHIDTR 244
EAEY A S +WL + LQ P PT +F DN +AI +A N V HER+KHI++
Sbjct: 488 EAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESD 547
Query: 245 YHFIRE 250
H +RE
Sbjct: 548 CHSVRE 553
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 179 bits (455), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 90/246 (36%), Positives = 140/246 (56%)
Query: 5 FDMTDIGLMGHFLGTEVKQMENGIFISQRGYAKEVLKRFKMESCNPVNTPLESGVVLRKC 64
F + D+G + +FLG E+ + GI I QR YA ++L + C P + P++ V
Sbjct: 308 FKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAH 367
Query: 65 TRRSDVDPTYFESLIGSLRYLTCTRPDILYGVGLVSRYMDTPDESHLNVAKRLLRYVKGT 124
+ VD + LIG L YL TR DI + V +S++ + P +H ++L Y+KGT
Sbjct: 368 SGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGT 427
Query: 125 LNNGLFFTCEQDFKLIGYSDSDWGRDLDERKSTSGFVFFMGYTAFTWSSKKQPIVTLSTC 184
+ GLF++ + + +L +SD+ + D R+ST+G+ F+G + +W SKKQ +V+ S+
Sbjct: 428 VGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSA 487
Query: 185 EAEYVAASSMVCHAIWLRNMLKHLQCPQVGPTEVFLDNKSAIALAKNPVCHERSKHIDTR 244
EAEY A S +WL + LQ P PT +F DN +AI +A N V HER+KHI++
Sbjct: 488 EAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESD 547
Query: 245 YHFIRE 250
H +RE
Sbjct: 548 CHSVRE 553
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 152 bits (383), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 116/200 (58%), Gaps = 1/200 (0%)
Query: 1 MVKEFDMTDIGLMGHFLGTEVKQMENGIFISQRGYAKEVLKRFKMESCNPVNTPLESGVV 60
+ F M D+G + +FLG ++K +G+F+SQ YA+++L M C P++TPL +
Sbjct: 27 LSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLN 86
Query: 61 LRKCTRRSDVDPTYFESLIGSLRYLTCTRPDILYGVGLVSRYMDTPDESHLNVAKRLLRY 120
T + DP+ F S++G+L+YLT TRPDI Y V +V + M P + ++ KR+LRY
Sbjct: 87 SSVSTAKYP-DPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRY 145
Query: 121 VKGTLNNGLFFTCEQDFKLIGYSDSDWGRDLDERKSTSGFVFFMGYTAFTWSSKKQPIVT 180
VKGT+ +GL+ + + DSDW R+ST+GF F+G +WS+K+QP V+
Sbjct: 146 VKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVS 205
Query: 181 LSTCEAEYVAASSMVCHAIW 200
S+ E EY A + W
Sbjct: 206 RSSTETEYRALALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 70.9 bits (172), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 5/87 (5%)
Query: 84 YLTCTRPDILYGVGLVSRYMDTPDESHLNVAKRLLRYVKGTLNNGLFFTCEQDFKLIGYS 143
YLT TRPD+ + V +S++ + + ++L YVKGT+ GLF++ D +L ++
Sbjct: 2 YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61
Query: 144 DSDWGRDLDERKSTSGF-----VFFMG 165
DSDW D R+S +GF ++F+G
Sbjct: 62 DSDWASCPDTRRSVTGFCSLVPLWFLG 88