BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000077.1_g0040.1
(93 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 113 1e-30
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 113 1e-30
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 62 3e-13
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 113 bits (283), Expect = 1e-30, Method: Composition-based stats.
Identities = 47/86 (54%), Positives = 68/86 (79%)
Query: 8 WVFKVKYKSDGSLERYKARLVAEGYTQQQGVDYQEPFSPVVKIQTVIVALTLAVTHQWLI 67
WV+K+KY SDG++ERYKARLVA+GYTQQ+G+D+ E FSPV K+ +V + L ++ + + +
Sbjct: 131 WVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTL 190
Query: 68 QQLGVSNAFLHADLTEDLYMKQPTGF 93
QL +SNAFL+ DL E++YMK P G+
Sbjct: 191 HQLDISNAFLNGDLDEEIYMKLPPGY 216
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 113 bits (283), Expect = 1e-30, Method: Composition-based stats.
Identities = 47/86 (54%), Positives = 68/86 (79%)
Query: 8 WVFKVKYKSDGSLERYKARLVAEGYTQQQGVDYQEPFSPVVKIQTVIVALTLAVTHQWLI 67
WV+K+KY SDG++ERYKARLVA+GYTQQ+G+D+ E FSPV K+ +V + L ++ + + +
Sbjct: 131 WVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTL 190
Query: 68 QQLGVSNAFLHADLTEDLYMKQPTGF 93
QL +SNAFL+ DL E++YMK P G+
Sbjct: 191 HQLDISNAFLNGDLDEEIYMKLPPGY 216
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 62.0 bits (149), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 39/53 (73%)
Query: 8 WVFKVKYKSDGSLERYKARLVAEGYTQQQGVDYQEPFSPVVKIQTVIVALTLA 60
WVFK K SDG+L+R KARLVA+G+ Q++G+ + E +SPVV+ T+ L +A
Sbjct: 73 WVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125