BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000077.1_g0050.1
(142 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 189 2e-56
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 189 2e-56
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 77 3e-18
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 189 bits (480), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 88/146 (60%), Positives = 116/146 (79%), Gaps = 5/146 (3%)
Query: 1 MTKEISALETNNTWSLTSLPPGKKPIGCKWVYKIKYRLDGSIERYKACLVAKGYTQVEGV 60
M EI A+ET +TW + +LPP KKPIGCKWVYKIKY DG+IERYKA LVAKGYTQ EG+
Sbjct: 102 MDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGI 161
Query: 61 DYHDTFAPVANLVTVCVLLSLASIQGWSLHQLDVNNAFLQGDLEEEGYMIIPPGF-SNKG 119
D+ +TF+PV L +V ++L++++I ++LHQLD++NAFL GDL+EE YM +PPG+ + +G
Sbjct: 162 DFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQG 221
Query: 120 DT----RVCRLKKSLYGLQQASTQWF 141
D+ VC LKKS+YGL+QAS QWF
Sbjct: 222 DSLPPNAVCYLKKSIYGLKQASRQWF 247
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 189 bits (480), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 88/146 (60%), Positives = 116/146 (79%), Gaps = 5/146 (3%)
Query: 1 MTKEISALETNNTWSLTSLPPGKKPIGCKWVYKIKYRLDGSIERYKACLVAKGYTQVEGV 60
M EI A+ET +TW + +LPP KKPIGCKWVYKIKY DG+IERYKA LVAKGYTQ EG+
Sbjct: 102 MDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGI 161
Query: 61 DYHDTFAPVANLVTVCVLLSLASIQGWSLHQLDVNNAFLQGDLEEEGYMIIPPGF-SNKG 119
D+ +TF+PV L +V ++L++++I ++LHQLD++NAFL GDL+EE YM +PPG+ + +G
Sbjct: 162 DFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQG 221
Query: 120 DT----RVCRLKKSLYGLQQASTQWF 141
D+ VC LKKS+YGL+QAS QWF
Sbjct: 222 DSLPPNAVCYLKKSIYGLKQASRQWF 247
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 76.6 bits (187), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 53/82 (64%)
Query: 1 MTKEISALETNNTWSLTSLPPGKKPIGCKWVYKIKYRLDGSIERYKACLVAKGYTQVEGV 60
M +E+ AL N TW L P + +GCKWV+K K DG+++R KA LVAKG+ Q EG+
Sbjct: 44 MQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGI 103
Query: 61 DYHDTFAPVANLVTVCVLLSLA 82
+ +T++PV T+ +L++A
Sbjct: 104 YFVETYSPVVRTATIRTILNVA 125