BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000077.1_g0080.1
(120 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 64 3e-13
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 49 2e-07
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 49 2e-07
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 63.9 bits (154), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 56/110 (50%), Gaps = 25/110 (22%)
Query: 19 LGKEFSMKHLGTLHYFLDIEVHSCFSSSSLKLSQTKYITELLHKSDILDSRQ-------- 70
L FSMK LG +HYFL I++ + S L LSQTKY ++L+ + +LD +
Sbjct: 27 LSSTFSMKDLGPVHYFLGIQIKT--HPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLPLK 84
Query: 71 ---SLIHASYGKGFQNWMEILLRIHCVYRSVVGGLQYAIMTRADITYAVN 117
S+ A Y +RS+VG LQY +TR DI+YAVN
Sbjct: 85 LNSSVSTAKYPDPSD------------FRSIVGALQYLTLTRPDISYAVN 122
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 48.5 bits (114), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
Query: 17 SDLGKEFSMKHLGTLHYFLDIEVHSCFSSSSLKLSQTKYITELLHKSDILDSRQSLIHAS 76
S L F ++ LG L YFL +E+ S++ + + Q KY +LL ++ +L + S +
Sbjct: 302 SQLKSCFKLRDLGPLKYFLGLEIAR--SAAGINICQRKYALDLLDETGLLGCKPSSVPMD 359
Query: 77 YGKGFQNWMEILLRIHCVYRSVVGGLQYAIMTRADITYAVNYLA 120
F YR ++G L Y +TR DI++AVN L+
Sbjct: 360 PSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLS 403
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 48.5 bits (114), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
Query: 17 SDLGKEFSMKHLGTLHYFLDIEVHSCFSSSSLKLSQTKYITELLHKSDILDSRQSLIHAS 76
S L F ++ LG L YFL +E+ S++ + + Q KY +LL ++ +L + S +
Sbjct: 302 SQLKSCFKLRDLGPLKYFLGLEIAR--SAAGINICQRKYALDLLDETGLLGCKPSSVPMD 359
Query: 77 YGKGFQNWMEILLRIHCVYRSVVGGLQYAIMTRADITYAVNYLA 120
F YR ++G L Y +TR DI++AVN L+
Sbjct: 360 PSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLS 403