BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000077.1_g0170.1
(84 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G14990.2 | transmembrane protein | Chr1:5167354-5168151 REVER... 95 2e-26
AT1G14990.1 | transmembrane protein | Chr1:5167354-5168151 REVER... 94 2e-26
>AT1G14990.2 | transmembrane protein | Chr1:5167354-5168151 REVERSE
LENGTH=132 | 201606
Length = 132
Score = 94.7 bits (234), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 47/53 (88%)
Query: 4 QFYATYQAGTKLLADTAKLYKAALENCFELEDWGPIEFSVMAKHFERQGKQPY 56
QFYA+Y AGT+LL DTAKLYKAAL NC+E EDWGP+EF +MAKHF+RQGK PY
Sbjct: 50 QFYASYPAGTELLTDTAKLYKAALGNCYESEDWGPVEFCIMAKHFDRQGKSPY 102
>AT1G14990.1 | transmembrane protein | Chr1:5167354-5168151 REVERSE
LENGTH=122 | 201606
Length = 122
Score = 94.4 bits (233), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 47/53 (88%)
Query: 4 QFYATYQAGTKLLADTAKLYKAALENCFELEDWGPIEFSVMAKHFERQGKQPY 56
QFYA+Y AGT+LL DTAKLYKAAL NC+E EDWGP+EF +MAKHF+RQGK PY
Sbjct: 50 QFYASYPAGTELLTDTAKLYKAALGNCYESEDWGPVEFCIMAKHFDRQGKSPY 102