BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000077.1_g0210.1
(1427 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 559 e-178
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 559 e-178
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 222 2e-65
AT1G21280.1 | Copia-like polyprotein/retrotransposon | Chr1:7447... 105 4e-25
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 101 3e-24
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 559 bits (1441), Expect = e-178, Method: Compositional matrix adjust.
Identities = 278/575 (48%), Positives = 386/575 (67%), Gaps = 14/575 (2%)
Query: 860 IHPSRPSRNRRPPTHLNDYICHSYLDSDVVYPFTQYLNFEQFSGSHQVFLNSVITTVEPT 919
+H S R R P +L DY CHS + S ++ +Q+L++E+ S + FL + EP+
Sbjct: 31 VHTSH--RRTRKPAYLQDYYCHS-VASLTIHDISQFLSYEKVSPLYHSFLVCIAKAKEPS 87
Query: 920 SFSQVVKSPHWREAMSKEIAALESNNTWTITDLPSGKRAIGCKWVYKIKFKADGSIERYK 979
++++ + W AM EI A+E+ +TW I LP K+ IGCKWVYKIK+ +DG+IERYK
Sbjct: 88 TYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYK 147
Query: 980 ARLVAKGYTQIEGLDFHDTFAPVAKLVTVRVLLSIASIKGWSLHQLDVNNAFLQSDLDEE 1039
ARLVAKGYTQ EG+DF +TF+PV KL +V+++L+I++I ++LHQLD++NAFL DLDEE
Sbjct: 148 ARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEE 207
Query: 1040 VFMKLPPGFS-KQGES----KVCRLRKSLYGLKQASRQWFSKFSSVLIKKGFTQSLSDYS 1094
++MKLPPG++ +QG+S VC L+KS+YGLKQASRQWF KFS LI GF QS SD++
Sbjct: 208 IYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHT 267
Query: 1095 LFSLCTSSVQLYVLVYVYDIVITGNDESAISKLKSFLHATFSLKDLGPLKYFLGIEVSRS 1154
F T+++ L VLVYV DI+I N+++A+ +LKS L + F L+DLGPLKYFLG+E++RS
Sbjct: 268 YFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARS 327
Query: 1155 SKGIFLCQRKYAIDIIKDSGLSACRPSPFPMEQKLRLSPSDGDPLPDPTVYRRLIGRLLY 1214
+ GI +CQRKYA+D++ ++GL C+PS PM+ + S G D YRRLIGRL+Y
Sbjct: 328 AAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMY 387
Query: 1215 LTVTRPNICYAVNNLSQFLQKPSTTHLDAAHRVLRYVKGSIGHSLLLSSSSSLHITGYCD 1274
L +TR +I +AVN LSQF + P H A ++L Y+KG++G L SS + + + + D
Sbjct: 388 LQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSD 447
Query: 1275 SDWARCPSTRRSTTGYFTMLGSSPLSWKSKKQPTIAKSSAKAEYRALAHLTSELQWLKYL 1334
+ + C TRRST GY LG+S +SWKSKKQ ++KSSA+AEYRAL+ T E+ WL
Sbjct: 448 ASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQF 507
Query: 1335 LKDLGITHSSPMTVHCDNKAALPIADNPVFHERTKHIEIDCHFVREK-IKANVIAPRFTP 1393
++L + S P + CDN AA+ IA N VFHERTKHIE DCH VRE+ + ++ F
Sbjct: 508 FRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQA 567
Query: 1394 TSEQLADIFTK---PLGADAFKTIIGKLGLTSLSA 1425
EQ D FT+ P+ I+ GL L A
Sbjct: 568 YDEQ--DGFTEYLSPILRGTIMYIVSMFGLAGLEA 600
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 559 bits (1441), Expect = e-178, Method: Compositional matrix adjust.
Identities = 278/575 (48%), Positives = 386/575 (67%), Gaps = 14/575 (2%)
Query: 860 IHPSRPSRNRRPPTHLNDYICHSYLDSDVVYPFTQYLNFEQFSGSHQVFLNSVITTVEPT 919
+H S R R P +L DY CHS + S ++ +Q+L++E+ S + FL + EP+
Sbjct: 31 VHTSH--RRTRKPAYLQDYYCHS-VASLTIHDISQFLSYEKVSPLYHSFLVCIAKAKEPS 87
Query: 920 SFSQVVKSPHWREAMSKEIAALESNNTWTITDLPSGKRAIGCKWVYKIKFKADGSIERYK 979
++++ + W AM EI A+E+ +TW I LP K+ IGCKWVYKIK+ +DG+IERYK
Sbjct: 88 TYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYK 147
Query: 980 ARLVAKGYTQIEGLDFHDTFAPVAKLVTVRVLLSIASIKGWSLHQLDVNNAFLQSDLDEE 1039
ARLVAKGYTQ EG+DF +TF+PV KL +V+++L+I++I ++LHQLD++NAFL DLDEE
Sbjct: 148 ARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEE 207
Query: 1040 VFMKLPPGFS-KQGES----KVCRLRKSLYGLKQASRQWFSKFSSVLIKKGFTQSLSDYS 1094
++MKLPPG++ +QG+S VC L+KS+YGLKQASRQWF KFS LI GF QS SD++
Sbjct: 208 IYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHT 267
Query: 1095 LFSLCTSSVQLYVLVYVYDIVITGNDESAISKLKSFLHATFSLKDLGPLKYFLGIEVSRS 1154
F T+++ L VLVYV DI+I N+++A+ +LKS L + F L+DLGPLKYFLG+E++RS
Sbjct: 268 YFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARS 327
Query: 1155 SKGIFLCQRKYAIDIIKDSGLSACRPSPFPMEQKLRLSPSDGDPLPDPTVYRRLIGRLLY 1214
+ GI +CQRKYA+D++ ++GL C+PS PM+ + S G D YRRLIGRL+Y
Sbjct: 328 AAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMY 387
Query: 1215 LTVTRPNICYAVNNLSQFLQKPSTTHLDAAHRVLRYVKGSIGHSLLLSSSSSLHITGYCD 1274
L +TR +I +AVN LSQF + P H A ++L Y+KG++G L SS + + + + D
Sbjct: 388 LQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSD 447
Query: 1275 SDWARCPSTRRSTTGYFTMLGSSPLSWKSKKQPTIAKSSAKAEYRALAHLTSELQWLKYL 1334
+ + C TRRST GY LG+S +SWKSKKQ ++KSSA+AEYRAL+ T E+ WL
Sbjct: 448 ASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQF 507
Query: 1335 LKDLGITHSSPMTVHCDNKAALPIADNPVFHERTKHIEIDCHFVREK-IKANVIAPRFTP 1393
++L + S P + CDN AA+ IA N VFHERTKHIE DCH VRE+ + ++ F
Sbjct: 508 FRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQA 567
Query: 1394 TSEQLADIFTK---PLGADAFKTIIGKLGLTSLSA 1425
EQ D FT+ P+ I+ GL L A
Sbjct: 568 YDEQ--DGFTEYLSPILRGTIMYIVSMFGLAGLEA 600
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 222 bits (565), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 107/226 (47%), Positives = 154/226 (68%), Gaps = 1/226 (0%)
Query: 1105 LYVLVYVYDIVITGNDESAISKLKSFLHATFSLKDLGPLKYFLGIEVSRSSKGIFLCQRK 1164
+Y+L+YV DI++TG+ + ++ L L +TFS+KDLGP+ YFLGI++ G+FL Q K
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60
Query: 1165 YAIDIIKDSGLSACRPSPFPMEQKLRLSPSDGDPLPDPTVYRRLIGRLLYLTVTRPNICY 1224
YA I+ ++G+ C+P P+ KL S S PDP+ +R ++G L YLT+TRP+I Y
Sbjct: 61 YAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAK-YPDPSDFRSIVGALQYLTLTRPDISY 119
Query: 1225 AVNNLSQFLQKPSTTHLDAAHRVLRYVKGSIGHSLLLSSSSSLHITGYCDSDWARCPSTR 1284
AVN + Q + +P+ D RVLRYVKG+I H L + +S L++ +CDSDWA C STR
Sbjct: 120 AVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTR 179
Query: 1285 RSTTGYFTMLGSSPLSWKSKKQPTIAKSSAKAEYRALAHLTSELQW 1330
RSTTG+ T LG + +SW +K+QPT+++SS + EYRALA +EL W
Sbjct: 180 RSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>AT1G21280.1 | Copia-like polyprotein/retrotransposon |
Chr1:7447690-7448403 REVERSE LENGTH=237 | 201606
Length = 237
Score = 105 bits (263), Expect = 4e-25, Method: Composition-based stats.
Identities = 61/177 (34%), Positives = 95/177 (53%), Gaps = 8/177 (4%)
Query: 5 LRAKDKFGFVDGSIPKPTSPNQLHS-WGRCNDLVSSWIINSIAPDIRSSVLYDESAADIW 63
LR KFGF+DG++PKP + L+ W +CN +V W++NS+ + SV+Y E+A +W
Sbjct: 53 LRVTKKFGFIDGTLPKPDPFSPLYQPWEQCNAMVMYWLMNSMTDKLLESVMYAETAHKMW 112
Query: 64 RNLYERFFQTNAPKIYQLKRAISSFKQEGHDVSSYFTQLKTLQDELQSLMVIDPCICGQ- 122
+L F KIYQL+R +++ +Q G V YF +L + EL I C CG
Sbjct: 113 EDLRRVFVPCVDLKIYQLRRRLATLRQGGDSVEEYFGKLSKVWMELSEYAPIPECKCGGC 172
Query: 123 ----GKSLLDRTNQERAMEFLQG--LHDRFLAIRSQILLMDPFPSILKIHSLVKQEE 173
K + +E+ EFL G L+ F A+ ++I+ P PS+ + ++VK E
Sbjct: 173 NCECTKRAEEAREKEQRYEFLMGLKLNQGFEAVTTKIMFQKPPPSLHEAFAMVKDAE 229
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase) |
ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 101 bits (251), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 71/107 (66%), Gaps = 2/107 (1%)
Query: 911 SVITTV--EPTSFSQVVKSPHWREAMSKEIAALESNNTWTITDLPSGKRAIGCKWVYKIK 968
++ TT+ EP S +K P W +AM +E+ AL N TW + P + +GCKWV+K K
Sbjct: 19 TITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTK 78
Query: 969 FKADGSIERYKARLVAKGYTQIEGLDFHDTFAPVAKLVTVRVLLSIA 1015
+DG+++R KARLVAKG+ Q EG+ F +T++PV + T+R +L++A
Sbjct: 79 LHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125