BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000077.1_g0220.1
(116 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G19260.1 | TTF-type zinc finger protein with HAT dimerization... 94 2e-23
AT3G29765.1 | General transcription factor 2-related zinc finger... 94 3e-23
AT2G06541.2 | TTF-type zinc finger protein with HAT dimerization... 87 8e-21
AT2G06541.1 | TTF-type zinc finger protein with HAT dimerization... 87 9e-21
AT3G31402.2 | General transcription factor 2-related zinc finger... 57 2e-10
>AT1G19260.1 | TTF-type zinc finger protein with HAT dimerization
domain-containing protein | Chr1:6657260-6659569 REVERSE
LENGTH=769 | 201606
Length = 769
Score = 94.0 bits (232), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 77/114 (67%), Gaps = 2/114 (1%)
Query: 4 EDQLQNYIIDMKSSNEFIGLKEIVDLAKKMVEKIKDKVYPLVYLLLTLTLL--VATATVE 61
+ QL+ Y+ ++K+ F LK + DLA+ MVE K +PLVY LL ++L+ VATATVE
Sbjct: 653 DHQLEIYLDNVKNDERFTDLKCLGDLARVMVETRKHLSHPLVYRLLKVSLILPVATATVE 712
Query: 62 RVFSGMSIVKNRLQNRMGDECMNENLLAYIEKDVFDALSNEVIMQQFQKMKTRR 115
R FS M+ VK L+NR+GD +++ L+ +IEK + ++NE ++++FQ M RR
Sbjct: 713 RCFSAMNFVKTTLRNRIGDMFLSDCLVCFIEKQALNTVTNESVIKRFQDMSERR 766
>AT3G29765.1 | General transcription factor 2-related zinc finger
protein | Chr3:11595467-11597077 REVERSE LENGTH=536 |
201606
Length = 536
Score = 93.6 bits (231), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 76/114 (66%), Gaps = 2/114 (1%)
Query: 4 EDQLQNYIIDMKSSNEFIGLKEIVDLAKKMVEKIKDKVYPLVYLLLTLTLL--VATATVE 61
+ QL+ Y+ ++K+ F L+ + DLA+ MVE K +PLVY LL L+L+ VATATV
Sbjct: 420 DHQLEIYLDNVKNDERFTDLEHLGDLARVMVETRKHLSHPLVYRLLKLSLILPVATATVV 479
Query: 62 RVFSGMSIVKNRLQNRMGDECMNENLLAYIEKDVFDALSNEVIMQQFQKMKTRR 115
R FS M+ VK L+NR GD +++ L+ +IEK V + ++NE ++++FQ M RR
Sbjct: 480 RCFSAMNFVKTTLRNRFGDVFLSDCLVCFIEKQVLNTVTNESVIKRFQDMSERR 533
>AT2G06541.2 | TTF-type zinc finger protein with HAT dimerization
domain-containing protein | Chr2:2598222-2600326 REVERSE
LENGTH=564 | 201606
Length = 564
Score = 86.7 bits (213), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 76/113 (67%), Gaps = 3/113 (2%)
Query: 4 EDQLQNYIIDMKSSNEFIGLKEIVDLAKKMVEKIKDKVYPLVYLLL--TLTLLVATATVE 61
E QL YI +++ + F LK + DLA+ M+E K +P VY LL LTL +ATATVE
Sbjct: 449 EHQLGLYIDNIREDDRFANLKSLGDLARVMIETRKHLSHPQVYRLLKVVLTLPIATATVE 508
Query: 62 RVFSGMSIVKNRLQNRMGDECMNENLLAYIEKDVFDALSNEVIMQQFQKMKTR 114
R FS ++VK L+NR+ D+ +N+ ++ +++++FD + N+V++++FQ M+ R
Sbjct: 509 RCFSA-TVVKTTLRNRISDQFLNDYVVCLVKRELFDTVINKVVIKRFQSMENR 560
>AT2G06541.1 | TTF-type zinc finger protein with HAT dimerization
domain-containing protein | Chr2:2598222-2600326 REVERSE
LENGTH=592 | 201606
Length = 592
Score = 86.7 bits (213), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 76/113 (67%), Gaps = 3/113 (2%)
Query: 4 EDQLQNYIIDMKSSNEFIGLKEIVDLAKKMVEKIKDKVYPLVYLLL--TLTLLVATATVE 61
E QL YI +++ + F LK + DLA+ M+E K +P VY LL LTL +ATATVE
Sbjct: 477 EHQLGLYIDNIREDDRFANLKSLGDLARVMIETRKHLSHPQVYRLLKVVLTLPIATATVE 536
Query: 62 RVFSGMSIVKNRLQNRMGDECMNENLLAYIEKDVFDALSNEVIMQQFQKMKTR 114
R FS ++VK L+NR+ D+ +N+ ++ +++++FD + N+V++++FQ M+ R
Sbjct: 537 RCFSA-TVVKTTLRNRISDQFLNDYVVCLVKRELFDTVINKVVIKRFQSMENR 588
>AT3G31402.2 | General transcription factor 2-related zinc finger
protein | Chr3:12770931-12773539 REVERSE LENGTH=311 |
201606
Length = 311
Score = 56.6 bits (135), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 4 EDQLQNYIIDMKSSNEFIGLKEIVDLAKKMVEKIKDKVYPLVYLLLTLTLL--VATATVE 61
E +L YI +++ F LK + D+A+K+VE K YP Y LL L L+ VATATVE
Sbjct: 211 EKELSIYIDTVRNDERFSNLKNLGDIAQKVVETRKHLSYPFGYRLLKLVLILHVATATVE 270
Query: 62 RVFSGMSIVKNRLQNRMGDECMNE 85
R FS M I ++ + N GD+ E
Sbjct: 271 RCFSAMKI-RSPVLNYQGDDFSGE 293