BLAST Resut 
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000077.1_g0240.1
         (199 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G29090.1 | Ribonuclease H-like superfamily protein | Chr4:143...    52   1e-07
AT2G22440.1 | non-LTR retroelement reverse transcriptase | Chr2:...    45   2e-05

>AT4G29090.1 | Ribonuclease H-like superfamily protein |
           Chr4:14333528-14335255 FORWARD LENGTH=575 | 201606
          Length = 575

 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 69/165 (41%), Gaps = 15/165 (9%)

Query: 42  WHSILKTKYTMRHNILWLIGDGTSIKIRTDPWIPSLPNKTPTLINELP-------DNLFW 94
           W SI  ++  +R     ++G+G  I I    W+ S P      +  +P        ++  
Sbjct: 111 WKSIHASQEILRQGARAVVGNGEDIIIWRHKWLDSKPASAALRMQRVPPQEYASVSSILK 170

Query: 95  VSDLISNSNNSWNIETLNKYFGNSSVQAIQEIIIPQSHQRDTSIWCPTYNGKFNTKSYYA 154
           VSDLI  S   W  + +   F     + I E+        D+  W  T +G +  KS Y 
Sbjct: 171 VSDLIDESGREWRKDVIEMLFPEVERKLIGELRPGGRRILDSYTWDYTSSGDYTVKSGYW 230

Query: 155 EL------RSLPVLSLDAYEFP-WKKFWKIKGTNPNIQQFIWKLI 192
            L      RS P    +    P ++K WK + T+P IQ F+WK +
Sbjct: 231 VLTQIINKRSSPQEVSEPSLNPIYQKIWKSQ-TSPKIQHFLWKCL 274


>AT2G22440.1 | non-LTR retroelement reverse transcriptase |
           Chr2:9528910-9529917 FORWARD LENGTH=256 | 201606
          Length = 256

 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 44/93 (47%)

Query: 67  KIRTDPWIPSLPNKTPTLINELPDNLFWVSDLISNSNNSWNIETLNKYFGNSSVQAIQEI 126
           ++  DPWIP++  +    I  + D+L +V+DLI  + N W ++ L        +  I  I
Sbjct: 4   RVWKDPWIPTILARPAKSILNIRDSLLYVNDLIDQNTNLWKLDRLQALIDPVDIPLILGI 63

Query: 127 IIPQSHQRDTSIWCPTYNGKFNTKSYYAELRSL 159
              +++  D   W  T +G +  KS Y   R L
Sbjct: 64  RPSRTYLSDGFSWSHTKSGNYTVKSGYWVARDL 96

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