BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g0040.1
(499 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G01395.1 | conserved oligomeric Golgi complex subunit 4 | Chr... 357 e-115
>AT4G01395.1 | conserved oligomeric Golgi complex subunit 4 |
Chr4:573098-575648 REVERSE LENGTH=738 | 201606
Length = 738
Score = 357 bits (916), Expect = e-115, Method: Compositional matrix adjust.
Identities = 174/284 (61%), Positives = 225/284 (79%), Gaps = 5/284 (1%)
Query: 5 LETEDYESAAKYVSIFLQIDEKFKDFGSEQREHLLSSTKQLEGIVRNKLSSVVDQCDHTT 64
LE+EDYESAAK+V FLQID ++KD GS+Q E L +S +QLEGI + KL + +DQ DH T
Sbjct: 143 LESEDYESAAKFVQRFLQIDLQYKDSGSDQSEQLHASKEQLEGIAKKKLLAAIDQRDHPT 202
Query: 65 ILRFIKFFSLLGLEDEGLQVYVSYLKKVIAFSSRSEFEHLEELQEHNNGGVINQVNFVGC 124
ILRF++ +S LG+E EGLQ+YV YLKKVIA R E+E++ EL E G QVNFVGC
Sbjct: 203 ILRFVRLYSPLGMETEGLQLYVGYLKKVIALRGRMEYENVVELMEQGLG----QVNFVGC 258
Query: 125 FTKLFRDIVLVVEENAEILQSLCGEDGILYAICELQEECDTRGSLILKKYMEYRQLSRLK 184
T LF+DIV+ +EEN EIL+ LCGEDG+ YAICELQEECD RGSLILKKYM++R+L+ L
Sbjct: 259 LTNLFKDIVMAIEENDEILRGLCGEDGVAYAICELQEECDLRGSLILKKYMDFRKLAILA 318
Query: 185 YEI-NSYSKNLLSVGTTKGPDPKEIELYLEEILSLTQLGEDYTKFILSKIRGLRSVDPDL 243
+I NS + N+L G ++GPDP+E+ELY+EEILSL QLGEDYT+F++SKI+ L SVDP+L
Sbjct: 319 SDINNSPNLNILPGGASEGPDPREVELYVEEILSLMQLGEDYTEFMVSKIKSLTSVDPEL 378
Query: 244 DPKATKLFKSGNFNRVVQEITKFYVIFEESFMVESVRKAIAIDE 287
P ATK F++ +F++ +Q++T++YVI E FMVE+VRKAI IDE
Sbjct: 379 LPTATKAFRNKSFSKAIQDVTRYYVILEGFFMVENVRKAIRIDE 422