BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g0060.1
(386 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 286 9e-88
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 286 9e-88
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 193 2e-59
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 72 2e-15
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 286 bits (733), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 140/344 (40%), Positives = 218/344 (63%), Gaps = 5/344 (1%)
Query: 1 MELPPGVTNSE-----VGKVCKLKKALYGLKQSPRAWFGRFTKSMKAFGYKQSNFDHTLF 55
M+LPPG + VC LKK++YGLKQ+ R WF +F+ ++ FG+ QS+ DHT F
Sbjct: 210 MKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYF 269
Query: 56 IKQKLGKLTALIVYVDDMVVTGNDSVEMEALKNYLSQEFEMKDLGQSKYFLGIEVARSSQ 115
+K ++VYVDD+++ N+ ++ LK+ L F+++DLG KYFLG+E+ARS+
Sbjct: 270 LKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAA 329
Query: 116 GIFMSQRKYILDLLVETGMLDCKPVDTPIEANHHLGIFSDQVPCDKGRYQRLVGRLIYLS 175
GI + QRKY LDLL ETG+L CKP P++ + S D Y+RL+GRL+YL
Sbjct: 330 GINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQ 389
Query: 176 HTRPDIAYSISVVSQFMHNPSEEHMKAVFRILRYLKKSLGKGLLFRKGGDMEVMGYTDAD 235
TR DI+++++ +SQF P H +AV +IL Y+K ++G+GL + +M++ ++DA
Sbjct: 390 ITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDAS 449
Query: 236 WAGDITDRRSTSGYFTFVCGNMVTFRAKKQKVVARSSAESELRGMAQGVCELLWIRNILK 295
+ RRST+GY F+ +++++++KKQ+VV++SSAE+E R ++ E++W+ +
Sbjct: 450 FQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFR 509
Query: 296 DLGFKLVKAMDLHCDNKAAIMIAHNLIQHDRMKHVEVDRFFIRE 339
+L L K L CDN AAI IA N + H+R KH+E D +RE
Sbjct: 510 ELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 286 bits (733), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 140/344 (40%), Positives = 218/344 (63%), Gaps = 5/344 (1%)
Query: 1 MELPPGVTNSE-----VGKVCKLKKALYGLKQSPRAWFGRFTKSMKAFGYKQSNFDHTLF 55
M+LPPG + VC LKK++YGLKQ+ R WF +F+ ++ FG+ QS+ DHT F
Sbjct: 210 MKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYF 269
Query: 56 IKQKLGKLTALIVYVDDMVVTGNDSVEMEALKNYLSQEFEMKDLGQSKYFLGIEVARSSQ 115
+K ++VYVDD+++ N+ ++ LK+ L F+++DLG KYFLG+E+ARS+
Sbjct: 270 LKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAA 329
Query: 116 GIFMSQRKYILDLLVETGMLDCKPVDTPIEANHHLGIFSDQVPCDKGRYQRLVGRLIYLS 175
GI + QRKY LDLL ETG+L CKP P++ + S D Y+RL+GRL+YL
Sbjct: 330 GINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQ 389
Query: 176 HTRPDIAYSISVVSQFMHNPSEEHMKAVFRILRYLKKSLGKGLLFRKGGDMEVMGYTDAD 235
TR DI+++++ +SQF P H +AV +IL Y+K ++G+GL + +M++ ++DA
Sbjct: 390 ITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDAS 449
Query: 236 WAGDITDRRSTSGYFTFVCGNMVTFRAKKQKVVARSSAESELRGMAQGVCELLWIRNILK 295
+ RRST+GY F+ +++++++KKQ+VV++SSAE+E R ++ E++W+ +
Sbjct: 450 FQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFR 509
Query: 296 DLGFKLVKAMDLHCDNKAAIMIAHNLIQHDRMKHVEVDRFFIRE 339
+L L K L CDN AAI IA N + H+R KH+E D +RE
Sbjct: 510 ELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 193 bits (491), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 91/224 (40%), Positives = 140/224 (62%), Gaps = 1/224 (0%)
Query: 66 LIVYVDDMVVTGNDSVEMEALKNYLSQEFEMKDLGQSKYFLGIEVARSSQGIFMSQRKYI 125
L++YVDD+++TG+ + + L LS F MKDLG YFLGI++ G+F+SQ KY
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62
Query: 126 LDLLVETGMLDCKPVDTPIEANHHLGIFSDQVPCDKGRYQRLVGRLIYLSHTRPDIAYSI 185
+L GMLDCKP+ TP+ + + + + P D ++ +VG L YL+ TRPDI+Y++
Sbjct: 63 EQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYP-DPSDFRSIVGALQYLTLTRPDISYAV 121
Query: 186 SVVSQFMHNPSEEHMKAVFRILRYLKKSLGKGLLFRKGGDMEVMGYTDADWAGDITDRRS 245
++V Q MH P+ + R+LRY+K ++ GL K + V + D+DWAG + RRS
Sbjct: 122 NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 181
Query: 246 TSGYFTFVCGNMVTFRAKKQKVVARSSAESELRGMAQGVCELLW 289
T+G+ TF+ N++++ AK+Q V+RSS E+E R +A EL W
Sbjct: 182 TTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 72.4 bits (176), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 53/82 (64%)
Query: 172 IYLSHTRPDIAYSISVVSQFMHNPSEEHMKAVFRILRYLKKSLGKGLLFRKGGDMEVMGY 231
+YL+ TRPD+ ++++ +SQF M+AV+++L Y+K ++G+GL + D+++ +
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60
Query: 232 TDADWAGDITDRRSTSGYFTFV 253
D+DWA RRS +G+ + V
Sbjct: 61 ADSDWASCPDTRRSVTGFCSLV 82