BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g0090.1
(150 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G35695.1 | nuclease HARBI1-like protein | Chr5:13869120-13869... 96 3e-25
AT5G41980.1 | nuclease | Chr5:16793765-16794889 FORWARD LENGTH=3... 72 4e-15
AT4G10890.3 | DDE family endonuclease | Chr4:6688833-6692937 FOR... 53 2e-08
AT4G10890.2 | DDE family endonuclease | Chr4:6688833-6692937 FOR... 53 2e-08
AT4G10890.1 | DDE family endonuclease | Chr4:6688833-6692937 FOR... 53 2e-08
>AT5G35695.1 | nuclease HARBI1-like protein | Chr5:13869120-13869941
FORWARD LENGTH=211 | 201606
Length = 211
Score = 96.3 bits (238), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 59/90 (65%), Gaps = 5/90 (5%)
Query: 1 MNYLAPYRGVRYHFPGFRRSGQTR---TQKEIFNDRHSSLRNVIEQYFGVLKARFLILKC 57
+N+LAP+RGVRYH F +GQ R T E+FN RH SLRNVIE+ FG+ K+RF I K
Sbjct: 60 LNFLAPFRGVRYHLQEF--AGQRRDPETPHELFNLRHVSLRNVIERIFGIFKSRFAIFKS 117
Query: 58 MQPYPYATQVLIVVACMMVHNFIRNEMTTD 87
P+ Y Q +V+ C +HNF+R E +D
Sbjct: 118 APPFSYKKQAGLVLTCAALHNFLRKECRSD 147
>AT5G41980.1 | nuclease | Chr5:16793765-16794889 FORWARD LENGTH=374
| 201606
Length = 374
Score = 71.6 bits (174), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 74/142 (52%), Gaps = 19/142 (13%)
Query: 2 NYLAPYRGVRYHFPGFRRSGQTRTQ-KEIFNDRHSSLRNVIEQYFGVLKARFLILKCMQP 60
++APY GV S +R + KE+FN+RH L I + FG LK RF IL P
Sbjct: 231 GFIAPYHGV---------STNSREEAKEMFNERHKLLHRAIHRTFGALKERFPILLSAPP 281
Query: 61 YPYATQVLIVVACMMVHNFIRNEMTTDWLVQEHDNGGTEFDYDNKNERKEIYEETQSQTV 120
YP TQV +V+A +HN++R E D + + + E + +R+ EE Q + V
Sbjct: 282 YPLQTQVKLVIAACALHNYVRLEKPDDLVFRMFEE---ETLAEAGEDREVALEEEQVEIV 338
Query: 121 NQQ-----KQVEMDI-IRDQIA 136
Q+ ++VE + +RD+IA
Sbjct: 339 GQEHGFRPEEVEDSLRLRDEIA 360
>AT4G10890.3 | DDE family endonuclease | Chr4:6688833-6692937
FORWARD LENGTH=527 | 201606
Length = 527
Score = 52.8 bits (125), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 3 YLAPYRGVRYHFPGFRRSGQTRTQKEIFNDRHSSLRNVIEQYFGVLKARFLIL 55
YL P+R + YH F R G T +E+FN +H LR+VI++ FGV KA++ IL
Sbjct: 108 YLGPHRRILYHLGQFGRGGPPVTVQELFNRKHLDLRSVIDRTFGVWKAKWRIL 160
>AT4G10890.2 | DDE family endonuclease | Chr4:6688833-6692937
FORWARD LENGTH=527 | 201606
Length = 527
Score = 52.8 bits (125), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 3 YLAPYRGVRYHFPGFRRSGQTRTQKEIFNDRHSSLRNVIEQYFGVLKARFLIL 55
YL P+R + YH F R G T +E+FN +H LR+VI++ FGV KA++ IL
Sbjct: 108 YLGPHRRILYHLGQFGRGGPPVTVQELFNRKHLDLRSVIDRTFGVWKAKWRIL 160
>AT4G10890.1 | DDE family endonuclease | Chr4:6688833-6692937
FORWARD LENGTH=527 | 201606
Length = 527
Score = 52.8 bits (125), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 3 YLAPYRGVRYHFPGFRRSGQTRTQKEIFNDRHSSLRNVIEQYFGVLKARFLIL 55
YL P+R + YH F R G T +E+FN +H LR+VI++ FGV KA++ IL
Sbjct: 108 YLGPHRRILYHLGQFGRGGPPVTVQELFNRKHLDLRSVIDRTFGVWKAKWRIL 160