BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g0130.1
(248 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G02700.1 | NC domain-containing protein-like protein | Chr3:5... 311 e-108
AT5G06370.1 | NC domain-containing protein-like protein | Chr5:1... 275 2e-93
AT5G16360.1 | NC domain-containing protein-like protein | Chr5:5... 251 1e-83
AT1G01225.1 | NC domain-containing protein-like protein | Chr1:9... 234 3e-77
AT4G00905.1 | NC domain-containing protein-like protein | Chr4:3... 232 2e-76
>AT3G02700.1 | NC domain-containing protein-like protein |
Chr3:581727-582813 REVERSE LENGTH=252 | 201606
Length = 252
Score = 311 bits (798), Expect = e-108, Method: Compositional matrix adjust.
Identities = 159/242 (65%), Positives = 190/242 (78%), Gaps = 7/242 (2%)
Query: 1 MGLLSNKIGKEELQAGDHIYSWRNAYLYSHHGIYTSEGKVIHYTRGGGQEIGTGTFLDRV 60
MG LSNKI +++++ GDHIYSWR AY+Y+HHGIY G+V H+TRG GQE GTGTFLD +
Sbjct: 1 MGFLSNKISRDDVKPGDHIYSWRQAYIYAHHGIYVGNGQVNHFTRGDGQETGTGTFLDNI 60
Query: 61 IFSSSGTH--TPCENCVDNHESTTNGGVICSCLDCFLCGGDLYRFEYNVSPGLFLAKARG 118
I SSS H PC +C D + GGVI SCL+CFL GGDLY FEY+VSP +FLAK RG
Sbjct: 61 IVSSSHNHGDNPCPDCGDR---SNLGGVISSCLECFLAGGDLYVFEYSVSPAIFLAKPRG 117
Query: 119 GTCTLASSDPPTDVLYRASFLLQNGFGVYNIFKNNCEDFAIYCKTGLLVVTSISVGRSGQ 178
G CT+ASSDPP +V+YRA+FLLQNGFGVYN+FKNNCEDFAIYCKTGLLV + VGRSGQ
Sbjct: 118 GVCTIASSDPPEEVIYRANFLLQNGFGVYNVFKNNCEDFAIYCKTGLLVANT-DVGRSGQ 176
Query: 179 AASFLAAASAIISSPLRYLTTSFTGLSAVAGGMYCVSRFVSDMGVRRDVTKVPVESLVAT 238
AAS +AAAS ++SSPLR++ F GL+ GMYC SR VSD+G+R DV+KVPVE LVA
Sbjct: 177 AASIVAAASVLLSSPLRFV-AGFGGLAVAGYGMYCTSRLVSDIGMRWDVSKVPVERLVAD 235
Query: 239 AS 240
+
Sbjct: 236 VA 237
>AT5G06370.1 | NC domain-containing protein-like protein |
Chr5:1947299-1948432 REVERSE LENGTH=259 | 201606
Length = 259
Score = 275 bits (704), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 136/238 (57%), Positives = 175/238 (73%), Gaps = 7/238 (2%)
Query: 1 MGLLSNKIGKEELQAGDHIYSWRNAYLYSHHGIYTSEGKVIHYTRGGGQEIGTGTFLDRV 60
MGLLSN+I + L+ GDHIYSWR AY+Y+HHGIY + +VIH+TR G QE+GTGT LD +
Sbjct: 1 MGLLSNRIDRSSLKPGDHIYSWRTAYIYAHHGIYVGDDRVIHFTRRG-QEVGTGTVLDLI 59
Query: 61 IFSS--SGTHTPCENCVDNHESTTNGGVICSCLDCFLCGGDLYRFEYNVSPGLFLAKARG 118
+ SS S HT C CV +E GV+ SCL+CFL GG LYRFEY+V+ FL KARG
Sbjct: 60 LVSSGPSRNHTHCPTCVPPNEGH---GVVSSCLNCFLAGGVLYRFEYSVNAAHFLVKARG 116
Query: 119 GTCTLASSDPPTDVLYRASFLLQNGFGVYNIFKNNCEDFAIYCKTGLLVVTSISVGRSGQ 178
GTCTLA +DP V++RA LLQNGFG Y++FKNNCEDFAIYCKT LLV+ ++G+SGQ
Sbjct: 117 GTCTLAVADPNEIVVHRAKHLLQNGFGCYDVFKNNCEDFAIYCKTALLVLEGRTMGQSGQ 176
Query: 179 AASFLAAA-SAIISSPLRYLTTSFTGLSAVAGGMYCVSRFVSDMGVRRDVTKVPVESL 235
A S + +A++S+P+R LTT+ G++A A G+YC SR+ +D+G+R DV KV E L
Sbjct: 177 AVSIIGGPIAAVLSTPMRLLTTNVYGMAATAIGVYCASRYATDIGMRADVAKVEAEDL 234
>AT5G16360.1 | NC domain-containing protein-like protein |
Chr5:5355236-5356195 REVERSE LENGTH=283 | 201606
Length = 283
Score = 251 bits (642), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 136/269 (50%), Positives = 171/269 (63%), Gaps = 33/269 (12%)
Query: 1 MGLLSNKIGKEELQAGDHIYSWRNAYLYSHHGIYTSEGKVIHYTRGGGQEIGTGTFLDRV 60
MGL S+KI +++L+ GDHIYSWRNAY+YSHHG+Y + KVIH+TRGGG E GTGT LD++
Sbjct: 1 MGLFSHKISRDDLKPGDHIYSWRNAYIYSHHGVYVGDEKVIHFTRGGGLEFGTGTVLDKI 60
Query: 61 IFSSSGTH-TPCENCVDNHESTTNGGVICSCLDCFLCGGDLYRFEYNVSPGLFLAKARGG 119
I S H + C+D + + GGVI SCLDCFL GG+L+ FEY+ SP +FLAK RGG
Sbjct: 61 IDISIPNHGRRDKKCIDCGDQSNLGGVISSCLDCFLAGGNLHLFEYSASPSIFLAK-RGG 119
Query: 120 TCTLASSDPPTDVLYRASFLL-QNGFGVYNIFKNNCEDFAIYCKTGLLVVT-SISVGRSG 177
TCT+ASSDP +V+ RA FLL QNGFG Y++ NNCEDFAIYCKTGL V++ + G SG
Sbjct: 120 TCTIASSDPCDEVISRAKFLLLQNGFGEYDLLDNNCEDFAIYCKTGLFVLSVATKFGCSG 179
Query: 178 QAASFLAAASAI-----------------------------ISSPLRYLTTSFTGLSAVA 208
QA S AA + ISS ++Y+ GL+
Sbjct: 180 QANSVSAAGGVVALTLKVLGVKKKSSSGHEDDSVVSVVNQFISSTVKYVVPGIGGLALAE 239
Query: 209 GGMYCVSRFVSDMGVRRDVTKVPVESLVA 237
G YC+ R D+GVR+D KV VE LVA
Sbjct: 240 YGNYCIGRLFYDIGVRKDACKVSVEELVA 268
>AT1G01225.1 | NC domain-containing protein-like protein |
Chr1:96064-97242 FORWARD LENGTH=260 | 201606
Length = 260
Score = 234 bits (598), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 120/246 (48%), Positives = 158/246 (64%), Gaps = 6/246 (2%)
Query: 1 MGLLSNKIGKEELQAGDHIYSWRNAYLYSHHGIYTSEGKVIHYTRGGGQEIGTGTFLDRV 60
MGLL+NKI +EEL+ GDHIY++R + YSHHGI+ KV+H+ + + +
Sbjct: 1 MGLLTNKIEREELKPGDHIYTYRAIFAYSHHGIFVGGSKVVHFRPEHNPMDSSTSSISSS 60
Query: 61 IFSSSGTHTPCENCVDNHESTTNGGVICSCLDCFLCGGDLYRFEYNVSPGLFLAKARGGT 120
+ P D + GV+ SCLDCFL G LY FEY VSP +FL K RGGT
Sbjct: 61 SSEDICSIFP-----DCGFRQPDSGVVLSCLDCFLKNGSLYCFEYGVSPSVFLTKVRGGT 115
Query: 121 CTLASSDPPTDVLYRASFLLQNGFGVYNIFKNNCEDFAIYCKTGLLVVTSISVGRSGQAA 180
CT A SD V++RA +LLQNGFG Y+IFKNNCEDFA+YCKTGLL++ + VGRSGQA+
Sbjct: 116 CTTAQSDTTDSVIHRAMYLLQNGFGNYDIFKNNCEDFALYCKTGLLIMDKLGVGRSGQAS 175
Query: 181 SFLAAA-SAIISSPLRYLTTSFTGLSAVAGGMYCVSRFVSDMGVRRDVTKVPVESLVATA 239
S + A +A++SSP + L S G++ V GMYC+SR+ +D+GVR DV KV VE L
Sbjct: 176 SIVGAPLAALLSSPFKLLIPSPIGVATVTAGMYCMSRYATDIGVRSDVIKVSVEDLALNL 235
Query: 240 SIDEVE 245
+ +E
Sbjct: 236 DVKTIE 241
>AT4G00905.1 | NC domain-containing protein-like protein |
Chr4:387865-389060 FORWARD LENGTH=263 | 201606
Length = 263
Score = 232 bits (591), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 118/254 (46%), Positives = 160/254 (62%), Gaps = 6/254 (2%)
Query: 1 MGLLSNKIGKEELQAGDHIYSWRNAYLYSHHGIYTSEGKVIHYTRGGGQEIGT-----GT 55
MG+L+NK+ ++EL+ GDHIY++R + YSHHG++ KV+H+ T +
Sbjct: 1 MGVLTNKVERDELKPGDHIYTYRAVFAYSHHGVFVGGCKVVHFKPEHSLISPTLASSSSS 60
Query: 56 FLDRVIFSSSGTHTPCENCVDNHESTTNGGVICSCLDCFLCGGDLYRFEYNVSPGLFLAK 115
V + + PC D GV+ SCLDCFL G LYRF+Y VS +FL +
Sbjct: 61 SSSSVSEVNDSSEAPCPTYPDCGYKRPKSGVVLSCLDCFLKKGSLYRFDYGVSSSIFLTR 120
Query: 116 ARGGTCTLASSDPPTDVLYRASFLLQNGFGVYNIFKNNCEDFAIYCKTGLLVVTSISVGR 175
RGGTCT A SDP V++RA LLQNGFG YN+F+NNCEDFA+YCKTGLL++ VGR
Sbjct: 121 FRGGTCTTAPSDPLQTVIHRAMHLLQNGFGNYNVFQNNCEDFALYCKTGLLILDKNGVGR 180
Query: 176 SGQAASFLAAA-SAIISSPLRYLTTSFTGLSAVAGGMYCVSRFVSDMGVRRDVTKVPVES 234
SGQA+S + A +A++SSPL L + G++ V GMYC+SR+ +D+GVR DV KVPVE
Sbjct: 181 SGQASSIIGAPLAALLSSPLTLLIPNPVGVATVTAGMYCMSRYATDIGVRNDVIKVPVED 240
Query: 235 LVATASIDEVEVPR 248
L + ++ R
Sbjct: 241 LALNLGLKPLKRKR 254