BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g0140.1
(554 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1... 110 4e-25
AT1G40390.1 | DNAse I-like superfamily protein | Chr1:15432576-1... 73 1e-13
AT4G20520.1 | RNA binding / RNA-directed DNA polymerase | Chr4:1... 49 1e-05
>AT1G43760.1 | DNAse I-like superfamily protein |
Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
Length = 626
Score = 110 bits (274), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 173/406 (42%), Gaps = 35/406 (8%)
Query: 136 LVIGDLNCILDQSEKSGGQPAHLPT--IQHHKNIINNLGLHDLGFIGYLYTWTNRQFAGN 193
+++GD + I S+ +P ++ +N + + L D+ G YTW+N Q N
Sbjct: 222 ILVGDFDQIAATSDHYSVLQTSIPMRGLEEFQNCLRDSDLVDIPSRGVHYTWSNHQ-DDN 280
Query: 194 LIEERLDRAMANYNWLTSYPHSKINHLATLGSDHNPILLSTKNPSSLGRKPFKFIRTWMS 253
I +LDRA+AN +W +S+P + + SDH+P ++ +N +K F++ +
Sbjct: 281 PIIRKLDRAIANGDWFSSFPSAIAVFELSGVSDHSPCIIILENLPKRSKKCFRYFSFLST 340
Query: 254 HPNCASFNKSNWLT-IPNLIQAKLNSLA--IKLSK----------------WNKEVFDNL 294
HP W IP + + + SL +K +K KE D+L
Sbjct: 341 HPTFLVSLTVAWEEQIP--VGSHMFSLGEHLKAAKKCCKLLNRQGFGNIQHKTKEALDSL 398
Query: 295 ETNIKQLTQNL--QLIRNAEVFKNTYSQIETLLLQQESLWKEKSRIANINLGDRTPNIF- 351
E+ QL N L R V + ++ L ES +++KSRI + GD F
Sbjct: 399 ESIQSQLLTNPSDSLFRVEHVARKKWNFFAAAL---ESFYRQKSRIKWLQDGDANTRFFH 455
Query: 352 -MPRPRLRKNKILAIKRDDNTWANDEVEISMIFSNHIQKISTTAGSTMSSN----IKDCF 406
+ KN I ++ DD+ + ++ + + + + ++ + IKD
Sbjct: 456 KVILANQAKNLIKFLRMDDDVRVENVTQVKEMIVAYYTHLLGSDSDILTPDSVQRIKDIH 515
Query: 407 YPQISAVQNESLTVLPPYDEIRMATFSLKPGAAPGPDGFPSYFYQSNWDTVKEDIRLMTS 466
+ + L+ LP EI A F++ APGPD F + F+ +W VK+
Sbjct: 516 PFRCNDTLASRLSALPSDKEITAAVFAMPRNKAPGPDSFTAEFFWESWFVVKDSTIAAVK 575
Query: 467 SFFQNSTLPAMSNHTQICLLPKTKTPQSSADYRSISLLNTTYKIIT 512
FF+ L N T I L+PK + +R +S YKIIT
Sbjct: 576 EFFRTGHLLKRFNATAITLIPKVTGVDQLSMFRPVSCCTVVYKIIT 621
>AT1G40390.1 | DNAse I-like superfamily protein |
Chr1:15432576-15434674 REVERSE LENGTH=426 | 201606
Length = 426
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 108/237 (45%), Gaps = 17/237 (7%)
Query: 121 WDTLAHLV---PNNNTPWLVIGDLNCILDQSEKSGGQPAH--LPTIQHHKNIINNLGLHD 175
WD + L P N+PWLV+GD N I +E P++ L ++ + + + L D
Sbjct: 105 WDDITRLSASSPLCNSPWLVVGDFNQIASVTEHYSLMPSNISLQGLEDLQACMRDSDLVD 164
Query: 176 LGFIGYLYTWTNRQFAGNLIEERLDRAMANYNWLTSYPHSKINHLATLGSDHNPILLSTK 235
L G LYTW+N Q N I +LDRA+ N WL ++P + SDH ++
Sbjct: 165 LPCRGVLYTWSNHQ-QDNPILRKLDRAIVNGCWLATFPTASAIFDPPSDSDHAACMVILN 223
Query: 236 NPSSLG-RKPFKFIRTWMSHPNCASFNKSNW---LTIPNLI--QAKLNSLAIKLSK-WNK 288
N L +K FK+ +HP+ S + W + + + + +L A K + N+
Sbjct: 224 NSPPLSKKKSFKYFSFLSTHPDFISSILAAWQKEIAVGSFMFSLGELLKEAKKACRGLNR 283
Query: 289 EVFDNLETNIKQLTQNLQLIRNAEVFKNTYSQIETLLLQQESLWKEKSRIANINLGD 345
F N++ + + L R V + ++ L ES +K+KSRI + GD
Sbjct: 284 RGFSNIQAQLMSNPSDF-LFRAEHVARKNWNFFAAAL---ESFYKQKSRIKWLKEGD 336
>AT4G20520.1 | RNA binding / RNA-directed DNA polymerase |
Chr4:11045912-11047716 FORWARD LENGTH=376 | 201606
Length = 376
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 515 LANRLKPILAEIISPFQGAYVPGRQITDNIIISQELIHSF 554
+ RLKP++ +I P Q +++PGR TDNI+ QE +HS
Sbjct: 1 MVERLKPLMTNLIGPAQASFIPGRVSTDNIVFVQEAVHSM 40