BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g0170.1
(615 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G56550.2 | Pentatricopeptide repeat (PPR) superfamily protein... 690 0.0
AT3G56550.1 | Pentatricopeptide repeat (PPR) superfamily protein... 690 0.0
AT2G02980.1 | Pentatricopeptide repeat (PPR) superfamily protein... 450 e-151
AT4G21065.1 | Tetratricopeptide repeat (TPR)-like superfamily pr... 445 e-149
AT1G59720.1 | Tetratricopeptide repeat (TPR)-like superfamily pr... 416 e-138
>AT3G56550.2 | Pentatricopeptide repeat (PPR) superfamily protein |
Chr3:20952896-20954641 REVERSE LENGTH=581 | 201606
Length = 581
Score = 690 bits (1781), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/568 (56%), Positives = 423/568 (74%), Gaps = 2/568 (0%)
Query: 12 FISLLQGCNNMIKFQKIHAQVILNGYQDDPIISNKLLNLCAVSISGNLEYARFLFSQFKF 71
+ +LQGCN+M K +KIH+ VI+NG Q P I N LL CAVS++G+L +A+ LF F
Sbjct: 8 IVRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDS 67
Query: 72 -LQTSTWNSMIRGYSQSSTPLQAVFYYNHMMSQGLSRPDNFTFSFLLKACEKAKAEKKCR 130
TS WN +IRG+S SS+PL ++ +YN M+ +SRPD FTF+F LK+CE+ K+ KC
Sbjct: 68 DPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCL 127
Query: 131 EVHGLITKSGYSNDVVVCTNLVRSYAGNELIGMARLLFDEMPERDLVCWNSMISCYSQAG 190
E+HG + +SG+ +D +V T+LVR Y+ N + +A +FDEMP RDLV WN MI C+S G
Sbjct: 128 EIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVG 187
Query: 191 LHDEALKVYSRMRNSDVGLDEFTIVSLLSSCTHVGALNFGTQIHKFVDENGFMQNVFVGN 250
LH++AL +Y RM N V D +T+V+LLSSC HV ALN G +H+ + VFV N
Sbjct: 188 LHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSN 247
Query: 251 ALIDMYAKCGSLDMSRWVFDRMRKRDVFSWNSIIIGLGVHGSGDEAIPFFEQMLTARVQP 310
ALIDMYAKCGSL+ + VF+ MRKRDV +WNS+IIG GVHG G EAI FF +M+ + V+P
Sbjct: 248 ALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRP 307
Query: 311 NSITFLGLLCGCSHQGRIDEGIKYFKMMSSEFNIVPGIKHFGCMVDMFGRVGKLEEAMEF 370
N+ITFLGLL GCSHQG + EG+++F++MSS+F++ P +KH+GCMVD++GR G+LE ++E
Sbjct: 308 NAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEM 367
Query: 371 IDKSPTQEDPILWRTLLGACKIHKNVELGEVAMRHLVNLKALNAGDCVLLAGIYEAARDQ 430
I S EDP+LWRTLLG+CKIH+N+ELGEVAM+ LV L+A NAGD VL+ IY AA D
Sbjct: 368 IYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDA 427
Query: 431 QGVARMRKLIKTQGIKTVPGWSWIEVDNNVHKFVVDDKSHDDSDLIYSKLKEIIHRATLV 490
Q A MRKLI++ ++TVPGWSWIE+ + VHKFVVDDK H +S +IYS+L E+I+RA L
Sbjct: 428 QAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILA 487
Query: 491 GYKVEDESLVSGCEIGEECYSNSGSYHSEKLAIAFGLANTSEGTSLRIVKNLRVCRDCHS 550
GYK ED + + + + C ++ + HSEKLAIA+GL T+ GT+LRI KNLRVCRDCHS
Sbjct: 488 GYKPEDSNRTAP-TLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHS 546
Query: 551 FTKYVSKAFDRDIIVRDRVRFHHFKHGF 578
FTKYVSKAF+R+IIVRDRVRFHHF G
Sbjct: 547 FTKYVSKAFNREIIVRDRVRFHHFADGI 574
>AT3G56550.1 | Pentatricopeptide repeat (PPR) superfamily protein |
Chr3:20952896-20954641 REVERSE LENGTH=581 | 201606
Length = 581
Score = 690 bits (1781), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/568 (56%), Positives = 423/568 (74%), Gaps = 2/568 (0%)
Query: 12 FISLLQGCNNMIKFQKIHAQVILNGYQDDPIISNKLLNLCAVSISGNLEYARFLFSQFKF 71
+ +LQGCN+M K +KIH+ VI+NG Q P I N LL CAVS++G+L +A+ LF F
Sbjct: 8 IVRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDS 67
Query: 72 -LQTSTWNSMIRGYSQSSTPLQAVFYYNHMMSQGLSRPDNFTFSFLLKACEKAKAEKKCR 130
TS WN +IRG+S SS+PL ++ +YN M+ +SRPD FTF+F LK+CE+ K+ KC
Sbjct: 68 DPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCL 127
Query: 131 EVHGLITKSGYSNDVVVCTNLVRSYAGNELIGMARLLFDEMPERDLVCWNSMISCYSQAG 190
E+HG + +SG+ +D +V T+LVR Y+ N + +A +FDEMP RDLV WN MI C+S G
Sbjct: 128 EIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVG 187
Query: 191 LHDEALKVYSRMRNSDVGLDEFTIVSLLSSCTHVGALNFGTQIHKFVDENGFMQNVFVGN 250
LH++AL +Y RM N V D +T+V+LLSSC HV ALN G +H+ + VFV N
Sbjct: 188 LHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSN 247
Query: 251 ALIDMYAKCGSLDMSRWVFDRMRKRDVFSWNSIIIGLGVHGSGDEAIPFFEQMLTARVQP 310
ALIDMYAKCGSL+ + VF+ MRKRDV +WNS+IIG GVHG G EAI FF +M+ + V+P
Sbjct: 248 ALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRP 307
Query: 311 NSITFLGLLCGCSHQGRIDEGIKYFKMMSSEFNIVPGIKHFGCMVDMFGRVGKLEEAMEF 370
N+ITFLGLL GCSHQG + EG+++F++MSS+F++ P +KH+GCMVD++GR G+LE ++E
Sbjct: 308 NAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEM 367
Query: 371 IDKSPTQEDPILWRTLLGACKIHKNVELGEVAMRHLVNLKALNAGDCVLLAGIYEAARDQ 430
I S EDP+LWRTLLG+CKIH+N+ELGEVAM+ LV L+A NAGD VL+ IY AA D
Sbjct: 368 IYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDA 427
Query: 431 QGVARMRKLIKTQGIKTVPGWSWIEVDNNVHKFVVDDKSHDDSDLIYSKLKEIIHRATLV 490
Q A MRKLI++ ++TVPGWSWIE+ + VHKFVVDDK H +S +IYS+L E+I+RA L
Sbjct: 428 QAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILA 487
Query: 491 GYKVEDESLVSGCEIGEECYSNSGSYHSEKLAIAFGLANTSEGTSLRIVKNLRVCRDCHS 550
GYK ED + + + + C ++ + HSEKLAIA+GL T+ GT+LRI KNLRVCRDCHS
Sbjct: 488 GYKPEDSNRTAP-TLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHS 546
Query: 551 FTKYVSKAFDRDIIVRDRVRFHHFKHGF 578
FTKYVSKAF+R+IIVRDRVRFHHF G
Sbjct: 547 FTKYVSKAFNREIIVRDRVRFHHFADGI 574
>AT2G02980.1 | Pentatricopeptide repeat (PPR) superfamily protein |
Chr2:868468-870279 FORWARD LENGTH=603 | 201606
Length = 603
Score = 450 bits (1157), Expect = e-151, Method: Compositional matrix adjust.
Identities = 233/569 (40%), Positives = 346/569 (60%), Gaps = 4/569 (0%)
Query: 10 HNFISLLQGCNNMIKFQKIHAQVILNGYQDDPIISNKLLNLCAVSIS-GNLEYARFLFSQ 68
N I L+ CN++ + +I A I + +D ++ KL+N C S + ++ YAR LF
Sbjct: 30 QNPILLISKCNSLRELMQIQAYAIKSHIEDVSFVA-KLINFCTESPTESSMSYARHLFEA 88
Query: 69 FKFLQTSTWNSMIRGYSQSSTPLQAVFYYNHMMSQGLSRPDNFTFSFLLKACEKAKAEKK 128
+NSM RGYS+ + PL+ + ++ G+ PDN+TF LLKAC AKA ++
Sbjct: 89 MSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGI-LPDNYTFPSLLKACAVAKALEE 147
Query: 129 CREVHGLITKSGYSNDVVVCTNLVRSYAGNELIGMARLLFDEMPERDLVCWNSMISCYSQ 188
R++H L K G ++V VC L+ Y E + AR +FD + E +VC+N+MI+ Y++
Sbjct: 148 GRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYAR 207
Query: 189 AGLHDEALKVYSRMRNSDVGLDEFTIVSLLSSCTHVGALNFGTQIHKFVDENGFMQNVFV 248
+EAL ++ M+ + +E T++S+LSSC +G+L+ G IHK+ ++ F + V V
Sbjct: 208 RNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKV 267
Query: 249 GNALIDMYAKCGSLDMSRWVFDRMRKRDVFSWNSIIIGLGVHGSGDEAIPFFEQMLTARV 308
ALIDM+AKCGSLD + +F++MR +D +W+++I+ HG ++++ FE+M + V
Sbjct: 268 NTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENV 327
Query: 309 QPNSITFLGLLCGCSHQGRIDEGIKYFKMMSSEFNIVPGIKHFGCMVDMFGRVGKLEEAM 368
QP+ ITFLGLL CSH GR++EG KYF M S+F IVP IKH+G MVD+ R G LE+A
Sbjct: 328 QPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAY 387
Query: 369 EFIDKSPTQEDPILWRTLLGACKIHKNVELGEVAMRHLVNLKALNAGDCVLLAGIYEAAR 428
EFIDK P P+LWR LL AC H N++L E + L + GD V+L+ +Y +
Sbjct: 388 EFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNK 447
Query: 429 DQQGVARMRKLIKTQGIKTVPGWSWIEVDNNVHKFVVDDKSHDDSDLIYSKLKEIIHRAT 488
+ V +RK++K + VPG S IEV+N VH+F D + ++ L E++
Sbjct: 448 KWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELK 507
Query: 489 LVGYKVEDESLVSGCEIGEECYSNSGSYHSEKLAIAFGLANTSEGTSLRIVKNLRVCRDC 548
L GY V D S+V + ++ + YHSEKLAI FGL NT GT++R+VKNLRVCRDC
Sbjct: 508 LSGY-VPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDC 566
Query: 549 HSFTKYVSKAFDRDIIVRDRVRFHHFKHG 577
H+ K +S F R +++RD RFHHF+ G
Sbjct: 567 HNAAKLISLIFGRKVVLRDVQRFHHFEDG 595
>AT4G21065.1 | Tetratricopeptide repeat (TPR)-like superfamily
protein | Chr4:11245976-11247763 FORWARD LENGTH=595 |
201606
Length = 595
Score = 445 bits (1145), Expect = e-149, Method: Compositional matrix adjust.
Identities = 229/571 (40%), Positives = 352/571 (61%), Gaps = 8/571 (1%)
Query: 13 ISLLQ--GCNNMIKFQKIHAQVILNGYQ--DDPIISNKLLNLCAVSISGNLEYARFLFSQ 68
I+LLQ G +++ K ++IHA I +G D + + + L ++ + YA +FS+
Sbjct: 19 INLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSK 78
Query: 69 F-KFLQTSTWNSMIRGYSQSSTPLQAVFYYNHMMSQGLSRPDNFTFSFLLKACEKAKAEK 127
K + WN++IRGY++ + A Y M GL PD T+ FL+KA +
Sbjct: 79 IEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVR 138
Query: 128 KCREVHGLITKSGYSNDVVVCTNLVRSYAGNELIGMARLLFDEMPERDLVCWNSMISCYS 187
+H ++ +SG+ + + V +L+ YA + A +FD+MPE+DLV WNS+I+ ++
Sbjct: 139 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 198
Query: 188 QAGLHDEALKVYSRMRNSDVGLDEFTIVSLLSSCTHVGALNFGTQIHKFVDENGFMQNVF 247
+ G +EAL +Y+ M + + D FTIVSLLS+C +GAL G ++H ++ + G +N+
Sbjct: 199 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLH 258
Query: 248 VGNALIDMYAKCGSLDMSRWVFDRMRKRDVFSWNSIIIGLGVHGSGDEAIPFFEQM-LTA 306
N L+D+YA+CG ++ ++ +FD M ++ SW S+I+GL V+G G EAI F+ M T
Sbjct: 259 SSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTE 318
Query: 307 RVQPNSITFLGLLCGCSHQGRIDEGIKYFKMMSSEFNIVPGIKHFGCMVDMFGRVGKLEE 366
+ P ITF+G+L CSH G + EG +YF+ M E+ I P I+HFGCMVD+ R G++++
Sbjct: 319 GLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKK 378
Query: 367 AMEFIDKSPTQEDPILWRTLLGACKIHKNVELGEVAMRHLVNLKALNAGDCVLLAGIYEA 426
A E+I P Q + ++WRTLLGAC +H + +L E A ++ L+ ++GD VLL+ +Y +
Sbjct: 379 AYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYAS 438
Query: 427 ARDQQGVARMRKLIKTQGIKTVPGWSWIEVDNNVHKFVVDDKSHDDSDLIYSKLKEIIHR 486
+ V ++RK + G+K VPG S +EV N VH+F++ DKSH SD IY+KLKE+ R
Sbjct: 439 EQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGR 498
Query: 487 ATLVGYKVEDESLVSGCEIGEECYSNSGSYHSEKLAIAFGLANTSEGTSLRIVKNLRVCR 546
GY + ++ E EE N+ YHSEK+AIAF L +T E + + +VKNLRVC
Sbjct: 499 LRSEGYVPQISNVYVDVE--EEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCA 556
Query: 547 DCHSFTKYVSKAFDRDIIVRDRVRFHHFKHG 577
DCH K VSK ++R+I+VRDR RFHHFK+G
Sbjct: 557 DCHLAIKLVSKVYNREIVVRDRSRFHHFKNG 587
>AT1G59720.1 | Tetratricopeptide repeat (TPR)-like superfamily
protein | Chr1:21939868-21941784 REVERSE LENGTH=638 |
201606
Length = 638
Score = 416 bits (1069), Expect = e-138, Method: Compositional matrix adjust.
Identities = 238/603 (39%), Positives = 347/603 (57%), Gaps = 34/603 (5%)
Query: 3 PPGSS--------RYHNFISLLQGCNNMIKFQKIHAQVILNGYQDDP---IISNKLLNLC 51
PP SS + SL + C++M + +++HA + Y ++P + K+L L
Sbjct: 34 PPASSPSASTAGNHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLS 93
Query: 52 AVSISGNLEYARFLFSQFKFLQTSTWNSMIRGYSQS-STPLQAVFYYNHMMSQGLSRPDN 110
S ++ YA +F + + WN++IR + S +A Y M+ +G S PD
Sbjct: 94 --SSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDK 151
Query: 111 FTFSFLLKACEKAKAEKKCREVHGLITKSGYSNDVVVCTNLVRSYAGNELIGMARLLFDE 170
TF F+LKAC + ++VH I K G+ DV V L+ Y + +AR +FDE
Sbjct: 152 HTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDE 211
Query: 171 MPERDLVCWNSMISCYSQAGLHDEALKVYSRMRNSDVGLDEFTIVSLLSSCTHVGALNFG 230
MPER LV WNSMI + G +D AL+++ M+ S D +T+ S+LS+C +G+L+ G
Sbjct: 212 MPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLG 270
Query: 231 TQIHKFVDEN---GFMQNVFVGNALIDMYAKCGSLDMSRWVFDRMRKRDVFSWNSIIIGL 287
T H F+ +V V N+LI+MY KCGSL M+ VF M+KRD+ SWN++I+G
Sbjct: 271 TWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGF 330
Query: 288 GVHGSGDEAIPFFEQMLTAR--VQPNSITFLGLLCGCSHQGRIDEGIKYFKMMSSEFNIV 345
HG +EA+ FF++M+ R V+PNS+TF+GLL C+H+G +++G +YF MM ++ I
Sbjct: 331 ATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIE 390
Query: 346 PGIKHFGCMVDMFGRVGKLEEAMEFIDKSPTQEDPILWRTLLGA-CKIHKNVELGEVAMR 404
P ++H+GC+VD+ R G + EA++ + P + D ++WR+LL A CK +VEL E R
Sbjct: 391 PALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIAR 450
Query: 405 HLVNLKALNA---GDC----VLLAGIYEAARDQQGVARMRKLIKTQGIKTVPGWSWIEVD 457
+++ K N G+C VLL+ +Y +A V +RKL+ GI+ PG S IE++
Sbjct: 451 NIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEIN 510
Query: 458 NNVHKFVVDDKSHDDSDLIYSKLKEIIHRATLVGYKVEDES---LVSGCEIGEECYSNSG 514
H+F D SH + IY +LK I R +GY + D S LV G + YS
Sbjct: 511 GISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGY-LPDRSQAPLVDATNDGSKEYSL-- 567
Query: 515 SYHSEKLAIAFGLANTSEGTSLRIVKNLRVCRDCHSFTKYVSKAFDRDIIVRDRVRFHHF 574
HSE+LAIAFGL N T +RI KNLRVC DCH TK +SK F+ +IIVRDRVRFHHF
Sbjct: 568 RLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHF 627
Query: 575 KHG 577
K G
Sbjct: 628 KDG 630