BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g0200.1
(111 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G73720.1 | transducin family protein / WD-40 repeat family pr... 144 4e-42
>AT1G73720.1 | transducin family protein / WD-40 repeat family
protein | Chr1:27725059-27729722 FORWARD LENGTH=511 |
201606
Length = 511
Score = 144 bits (364), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 67/76 (88%), Positives = 74/76 (97%)
Query: 4 LEIEARDVIKIVLQFCKENSLHQTFQTLQSECQVSLNTVDSLETFVADINSGRWDVILPQ 63
LEIEARDVIKI+LQFCKENSL+QTFQTLQSECQVSLNTVDS+ETF++DINSGRWD +LPQ
Sbjct: 3 LEIEARDVIKIMLQFCKENSLNQTFQTLQSECQVSLNTVDSVETFISDINSGRWDSVLPQ 62
Query: 64 VAQLKLPRKKLEDLYE 79
V+QLKLPR KLEDLYE
Sbjct: 63 VSQLKLPRNKLEDLYE 78