BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g0340.1
(380 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G00050.2 | basic helix-loop-helix (bHLH) DNA-binding superfam... 130 1e-34
AT4G00050.1 | basic helix-loop-helix (bHLH) DNA-binding superfam... 130 7e-34
AT4G00050.3 | basic helix-loop-helix (bHLH) DNA-binding superfam... 129 9e-34
AT2G20180.7 | phytochrome interacting factor 3-like 5 | Chr2:870... 107 1e-25
AT2G20180.5 | phytochrome interacting factor 3-like 5 | Chr2:870... 107 1e-25
>AT4G00050.2 | basic helix-loop-helix (bHLH) DNA-binding superfamily
protein | Chr4:18244-19848 FORWARD LENGTH=297 | 201606
Length = 297
Score = 130 bits (326), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/103 (68%), Positives = 84/103 (81%), Gaps = 4/103 (3%)
Query: 140 FTSTSLGSVPENTVSSWESFKEGGGTTMEGENKTKEKEREKSSGSTRRSRAAAIHNQSER 199
FTSTS+GS +NT+ +S + + E++ ++K KSS ST+RSRAAAIHNQSER
Sbjct: 66 FTSTSMGSH-DNTIDDHDSVCH---SRPQMEDEEEKKAGGKSSVSTKRSRAAAIHNQSER 121
Query: 200 KRRDKINQRMKTLQKLVPNSNKTDKASMLDEVIEYIKQLQAQV 242
KRRDKINQRMKTLQKLVPNS+KTDKASMLDEVIEY+KQLQAQV
Sbjct: 122 KRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQV 164
>AT4G00050.1 | basic helix-loop-helix (bHLH) DNA-binding superfamily
protein | Chr4:17863-19848 FORWARD LENGTH=399 | 201606
Length = 399
Score = 130 bits (326), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 71/103 (68%), Positives = 84/103 (81%), Gaps = 4/103 (3%)
Query: 140 FTSTSLGSVPENTVSSWESFKEGGGTTMEGENKTKEKEREKSSGSTRRSRAAAIHNQSER 199
FTSTS+GS +NT+ +S + + E++ ++K KSS ST+RSRAAAIHNQSER
Sbjct: 168 FTSTSMGSH-DNTIDDHDSVCH---SRPQMEDEEEKKAGGKSSVSTKRSRAAAIHNQSER 223
Query: 200 KRRDKINQRMKTLQKLVPNSNKTDKASMLDEVIEYIKQLQAQV 242
KRRDKINQRMKTLQKLVPNS+KTDKASMLDEVIEY+KQLQAQV
Sbjct: 224 KRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQV 266
>AT4G00050.3 | basic helix-loop-helix (bHLH) DNA-binding superfamily
protein | Chr4:17863-19715 FORWARD LENGTH=384 | 201606
Length = 384
Score = 129 bits (325), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 71/103 (68%), Positives = 84/103 (81%), Gaps = 4/103 (3%)
Query: 140 FTSTSLGSVPENTVSSWESFKEGGGTTMEGENKTKEKEREKSSGSTRRSRAAAIHNQSER 199
FTSTS+GS +NT+ +S + + E++ ++K KSS ST+RSRAAAIHNQSER
Sbjct: 168 FTSTSMGSH-DNTIDDHDSVCH---SRPQMEDEEEKKAGGKSSVSTKRSRAAAIHNQSER 223
Query: 200 KRRDKINQRMKTLQKLVPNSNKTDKASMLDEVIEYIKQLQAQV 242
KRRDKINQRMKTLQKLVPNS+KTDKASMLDEVIEY+KQLQAQV
Sbjct: 224 KRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQV 266
>AT2G20180.7 | phytochrome interacting factor 3-like 5 |
Chr2:8704525-8706237 REVERSE LENGTH=407 | 201606
Length = 407
Score = 107 bits (267), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/141 (48%), Positives = 85/141 (60%), Gaps = 16/141 (11%)
Query: 149 PENTVSSWESFKEGGGTTM-EGENKTKE-KEREKSSGSTRRSRAAAIHNQSERKRRDKIN 206
PE T KE TT E E++++E K+ S+ ST+RSRAA +HN SERKRRD+IN
Sbjct: 171 PEKTNVDDRKRKEREATTTDETESRSEETKQARVSTTSTKRSRAAEVHNLSERKRRDRIN 230
Query: 207 QRMKTLQKLVPNSNKTDKASMLDEVIEYIKQLQAQVQSVSMAAAIPHMNMMMPQSMTTMQ 266
+RMK LQ+L+P NK+DKASMLDE IEY+K LQ Q+Q +SM M M
Sbjct: 231 ERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMSMGCG-------MMPMMYPGM 283
Query: 267 QQFQLLMMAQMTQMGMSMGMN 287
QQ+ M M M MGMN
Sbjct: 284 QQY-------MPHMAMGMGMN 297
>AT2G20180.5 | phytochrome interacting factor 3-like 5 |
Chr2:8704276-8706237 REVERSE LENGTH=407 | 201606
Length = 407
Score = 107 bits (267), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/141 (48%), Positives = 85/141 (60%), Gaps = 16/141 (11%)
Query: 149 PENTVSSWESFKEGGGTTM-EGENKTKE-KEREKSSGSTRRSRAAAIHNQSERKRRDKIN 206
PE T KE TT E E++++E K+ S+ ST+RSRAA +HN SERKRRD+IN
Sbjct: 171 PEKTNVDDRKRKEREATTTDETESRSEETKQARVSTTSTKRSRAAEVHNLSERKRRDRIN 230
Query: 207 QRMKTLQKLVPNSNKTDKASMLDEVIEYIKQLQAQVQSVSMAAAIPHMNMMMPQSMTTMQ 266
+RMK LQ+L+P NK+DKASMLDE IEY+K LQ Q+Q +SM M M
Sbjct: 231 ERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMSMGCG-------MMPMMYPGM 283
Query: 267 QQFQLLMMAQMTQMGMSMGMN 287
QQ+ M M M MGMN
Sbjct: 284 QQY-------MPHMAMGMGMN 297