BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g0380.1
(508 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 142 1e-35
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 142 1e-35
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 74 1e-14
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 65 4e-12
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 142 bits (357), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 170/347 (48%), Gaps = 25/347 (7%)
Query: 169 EPHSVEECRKRTDWVKWKEAILKELHSLSKRNVFGPVVLTSKDVNPVGFKWVFVRKRNEK 228
EP + E + +++ W A+ E+ ++ + + L + P+G KWV+ K N
Sbjct: 85 EPSTYNEAK---EFLVWCGAMDDEIGAMETTHTWEICTL-PPNKKPIGCKWVYKIKYNSD 140
Query: 229 NEVVRYKARLVAQGFLERPGIHYKETYSPVMDGISFRYLISSAVLEELEMSLMDVITAYL 288
+ RYKARLVA+G+ ++ GI + ET+SPV S + +++ + + + +D+ A+L
Sbjct: 141 GTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFL 200
Query: 289 YERLDTDIYMKVHEGFKFPKGN---PCTMYSLKLNRALYGLKQSGRMWYNRLSEYLIKEG 345
LD +IYMK+ G+ +G+ P + LK +++YGLKQ+ R W+ + S LI G
Sbjct: 201 NGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLK--KSIYGLKQASRQWFLKFSVTLIGFG 258
Query: 346 YANDLICPCIFITKGDAGIAIFAVYVDDINLIGTPE-ELSKATEYLKKAFEMKDLVKTKF 404
+ F+ VYVDDI + + + + LK F+++DL K+
Sbjct: 259 FVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKY 318
Query: 405 CLGLQIGRNRSGILVHQTLYTEKVLKRFNMENSYPISTPM---VVRSRDTLKDSFRPKEE 461
LGL+I R+ +GI + Q Y +L + P S PM V S + D K
Sbjct: 319 FLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKA- 377
Query: 462 NEPLLRPEVPYLSVIGALSHLAQCTRPDIAFVVNLLATYSFAPTKRH 508
Y +IG L +L Q TR DI+F VN L+ +S AP H
Sbjct: 378 ----------YRRLIGRLMYL-QITRLDISFAVNKLSQFSEAPRLAH 413
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 142 bits (357), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 170/347 (48%), Gaps = 25/347 (7%)
Query: 169 EPHSVEECRKRTDWVKWKEAILKELHSLSKRNVFGPVVLTSKDVNPVGFKWVFVRKRNEK 228
EP + E + +++ W A+ E+ ++ + + L + P+G KWV+ K N
Sbjct: 85 EPSTYNEAK---EFLVWCGAMDDEIGAMETTHTWEICTL-PPNKKPIGCKWVYKIKYNSD 140
Query: 229 NEVVRYKARLVAQGFLERPGIHYKETYSPVMDGISFRYLISSAVLEELEMSLMDVITAYL 288
+ RYKARLVA+G+ ++ GI + ET+SPV S + +++ + + + +D+ A+L
Sbjct: 141 GTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFL 200
Query: 289 YERLDTDIYMKVHEGFKFPKGN---PCTMYSLKLNRALYGLKQSGRMWYNRLSEYLIKEG 345
LD +IYMK+ G+ +G+ P + LK +++YGLKQ+ R W+ + S LI G
Sbjct: 201 NGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLK--KSIYGLKQASRQWFLKFSVTLIGFG 258
Query: 346 YANDLICPCIFITKGDAGIAIFAVYVDDINLIGTPE-ELSKATEYLKKAFEMKDLVKTKF 404
+ F+ VYVDDI + + + + LK F+++DL K+
Sbjct: 259 FVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKY 318
Query: 405 CLGLQIGRNRSGILVHQTLYTEKVLKRFNMENSYPISTPM---VVRSRDTLKDSFRPKEE 461
LGL+I R+ +GI + Q Y +L + P S PM V S + D K
Sbjct: 319 FLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKA- 377
Query: 462 NEPLLRPEVPYLSVIGALSHLAQCTRPDIAFVVNLLATYSFAPTKRH 508
Y +IG L +L Q TR DI+F VN L+ +S AP H
Sbjct: 378 ----------YRRLIGRLMYL-QITRLDISFAVNKLSQFSEAPRLAH 413
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 73.9 bits (180), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 369 VYVDDINLIGTPEELSKATEY-LKKAFEMKDLVKTKFCLGLQIGRNRSGILVHQTLYTEK 427
+YVDDI L G+ L + L F MKDL + LG+QI + SG+ + QT Y E+
Sbjct: 5 LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64
Query: 428 VLKRFNMENSYPISTPMVVRSRDTLKDSFRPKEENEPLLRPEVPYLSVIGALSHLAQCTR 487
+L M + P+STP+ ++ ++ + P + + S++GAL +L TR
Sbjct: 65 ILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSD---------FRSIVGALQYLT-LTR 114
Query: 488 PDIAFVVNLLATYSFAPT 505
PDI++ VN++ PT
Sbjct: 115 PDISYAVNIVCQRMHEPT 132
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 65.1 bits (157), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 71/132 (53%), Gaps = 9/132 (6%)
Query: 149 INDKFALFVATDIITENDDYEPHSVEECRKRTDWVKWKEAILKELHSLSKRNVFGPVVLT 208
+N K++L + T I EP SV K W +A+ +EL +LS RN +V
Sbjct: 12 LNPKYSLTITTTI-----KKEPKSVIFALKDPGWC---QAMQEELDALS-RNKTWILVPP 62
Query: 209 SKDVNPVGFKWVFVRKRNEKNEVVRYKARLVAQGFLERPGIHYKETYSPVMDGISFRYLI 268
+ N +G KWVF K + + R KARLVA+GF + GI++ ETYSPV+ + R ++
Sbjct: 63 PVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTIL 122
Query: 269 SSAVLEELEMSL 280
+ A E+ S+
Sbjct: 123 NVAQQLEVGQSI 134