BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g0440.1
(695 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 115 3e-26
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 115 3e-26
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 68 3e-12
ATMG00300.1 | Gag-Pol-related retrotransposon family protein | C... 52 1e-07
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 95/179 (53%), Gaps = 3/179 (1%)
Query: 470 YASAIGSIMYAMVCTRPDVSYALSMCSRYQSNPGEKHWTAAKNILKYLRRTKDHFLVYGG 529
Y IG +MY + TR D+S+A++ S++ P H A IL Y++ T L Y
Sbjct: 378 YRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSS 436
Query: 530 KDELIAEGHVDASFQTDRDDFRSQSGYVFCLNGGAVSWKSSKQTTVADSTTEAEYLSASE 589
+ E+ + DASFQ+ +D RS +GY L +SWKS KQ V+ S+ EAEY + S
Sbjct: 437 QAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSF 496
Query: 590 AAKEGVWIKKFISELGVVPSIENGVTLYCDNNGAIAQAKEPRAHQKSKHILRKYHVIRE 648
A E +W+ +F EL + + L+CDN AI A H+++KHI H +RE
Sbjct: 497 ATDEMMWLAQFFRELQL--PLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 95/179 (53%), Gaps = 3/179 (1%)
Query: 470 YASAIGSIMYAMVCTRPDVSYALSMCSRYQSNPGEKHWTAAKNILKYLRRTKDHFLVYGG 529
Y IG +MY + TR D+S+A++ S++ P H A IL Y++ T L Y
Sbjct: 378 YRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSS 436
Query: 530 KDELIAEGHVDASFQTDRDDFRSQSGYVFCLNGGAVSWKSSKQTTVADSTTEAEYLSASE 589
+ E+ + DASFQ+ +D RS +GY L +SWKS KQ V+ S+ EAEY + S
Sbjct: 437 QAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSF 496
Query: 590 AAKEGVWIKKFISELGVVPSIENGVTLYCDNNGAIAQAKEPRAHQKSKHILRKYHVIRE 648
A E +W+ +F EL + + L+CDN AI A H+++KHI H +RE
Sbjct: 497 ATDEMMWLAQFFRELQL--PLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 10/155 (6%)
Query: 442 LPMTHGTTLSKTQCPRDPDELAHMKKVPYASAIGSIMYAMVCTRPDVSYALSMCSRYQSN 501
LP+ +++S + P DP + + S +G++ Y + TRPD+SYA+++ +
Sbjct: 81 LPLKLNSSVSTAKYP-DPSD--------FRSIVGALQY-LTLTRPDISYAVNIVCQRMHE 130
Query: 502 PGEKHWTAAKNILKYLRRTKDHFLVYGGKDELIAEGHVDASFQTDRDDFRSQSGYVFCLN 561
P + K +L+Y++ T H L +L + D+ + RS +G+ L
Sbjct: 131 PTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLG 190
Query: 562 GGAVSWKSSKQTTVADSTTEAEYLSASEAAKEGVW 596
+SW + +Q TV+ S+TE EY + + A E W
Sbjct: 191 CNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00300.1 | Gag-Pol-related retrotransposon family protein |
ChrM:89617-90054 REVERSE LENGTH=145 | 201606
Length = 145
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%)
Query: 195 NQSYLWHCRLGHINMKRMQKLHSDGLLGSCDLESYNTCEPCLVGKMTRSSFKGKGDRVSE 254
+++ LWH RL H++ + M+ L G L S + S CE C+ GK R +F
Sbjct: 67 DETRLWHSRLAHMSQRGMELLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKN 126
Query: 255 PLGLIHTDVCGPMS 268
PL +H+D+ G S
Sbjct: 127 PLDYVHSDLWGAPS 140