BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g0510.1
(472 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G16700.2 | phosphatidylserine decarboxylase 1 | Chr4:9396195-... 240 6e-75
AT4G16700.1 | phosphatidylserine decarboxylase 1 | Chr4:9395815-... 240 7e-74
AT5G18880.1 | RNA-directed DNA polymerase (reverse transcriptase... 55 4e-08
AT1G43730.1 | RNA-directed DNA polymerase (reverse transcriptase... 47 1e-05
AT3G25270.1 | Ribonuclease H-like superfamily protein | Chr3:920... 48 1e-05
>AT4G16700.2 | phosphatidylserine decarboxylase 1 |
Chr4:9396195-9398261 REVERSE LENGTH=385 | 201606
Length = 385
Score = 240 bits (613), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 142/179 (79%), Gaps = 4/179 (2%)
Query: 7 DLEEAALPLDQYASLRDFFTRTLKAGSRPIDPDPHCMVSPVDGTVLRFGELKESGAMIEQ 66
+LEEAALPL++Y SL+DFF R+LK G RPIDPDP C+VSPVDGTVLRFGELK + MIEQ
Sbjct: 158 NLEEAALPLEEYTSLQDFFVRSLKEGCRPIDPDPCCLVSPVDGTVLRFGELKGNRGMIEQ 217
Query: 67 VKGFSYSAYSLLGASSILTSVPDIFETDDEYKKSA-QNRSKRSWWRVSLASPQVREPTPT 125
VKG SYS +LLG +S+L P E +E K+ A ++S +SW RVSLASP++RE
Sbjct: 218 VKGHSYSVPALLGNNSLLPMEP---EGKNESKEEAVGDKSDKSWLRVSLASPKLRENVSA 274
Query: 126 GQMKGVFYCVIYLKPGDYHRVHSPVDCNIFLRRHFSGRLMPLNERATRTIKNLYVENER 184
MKG++YCVIYLKPGDYHR+HSP D N +RRHF+GRL P+NERATRTI+NLYVENER
Sbjct: 275 SPMKGLYYCVIYLKPGDYHRIHSPADWNATVRRHFAGRLFPVNERATRTIRNLYVENER 333
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Query: 346 VVLEGQWSEGFFALAAIGATNIGSIELSIEPELRTNKWKKLLTL 389
VVLEG W EGF ALAA+GATNIGSIE+ + ++ T+K + L L
Sbjct: 334 VVLEGIWKEGFMALAAVGATNIGSIEVGVM-KIETHKPQTLRNL 376
>AT4G16700.1 | phosphatidylserine decarboxylase 1 |
Chr4:9395815-9398261 REVERSE LENGTH=453 | 201606
Length = 453
Score = 240 bits (612), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 142/179 (79%), Gaps = 4/179 (2%)
Query: 7 DLEEAALPLDQYASLRDFFTRTLKAGSRPIDPDPHCMVSPVDGTVLRFGELKESGAMIEQ 66
+LEEAALPL++Y SL+DFF R+LK G RPIDPDP C+VSPVDGTVLRFGELK + MIEQ
Sbjct: 158 NLEEAALPLEEYTSLQDFFVRSLKEGCRPIDPDPCCLVSPVDGTVLRFGELKGNRGMIEQ 217
Query: 67 VKGFSYSAYSLLGASSILTSVPDIFETDDEYKKSA-QNRSKRSWWRVSLASPQVREPTPT 125
VKG SYS +LLG +S+L P E +E K+ A ++S +SW RVSLASP++RE
Sbjct: 218 VKGHSYSVPALLGNNSLLPMEP---EGKNESKEEAVGDKSDKSWLRVSLASPKLRENVSA 274
Query: 126 GQMKGVFYCVIYLKPGDYHRVHSPVDCNIFLRRHFSGRLMPLNERATRTIKNLYVENER 184
MKG++YCVIYLKPGDYHR+HSP D N +RRHF+GRL P+NERATRTI+NLYVENER
Sbjct: 275 SPMKGLYYCVIYLKPGDYHRIHSPADWNATVRRHFAGRLFPVNERATRTIRNLYVENER 333
Score = 104 bits (259), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 51/69 (73%), Positives = 59/69 (85%)
Query: 346 VVLEGQWSEGFFALAAIGATNIGSIELSIEPELRTNKWKKLLTLSEPPQERVYEPEGVGV 405
VVLEG W EGF ALAA+GATNIGSIEL IEPELRTNK KK L +EPP+ERVY+PEG+G+
Sbjct: 334 VVLEGIWKEGFMALAAVGATNIGSIELFIEPELRTNKPKKKLFPTEPPEERVYDPEGLGL 393
Query: 406 MLKKGEEVV 414
L+KG+EV
Sbjct: 394 RLEKGKEVA 402
>AT5G18880.1 | RNA-directed DNA polymerase (reverse
transcriptase)-related family protein |
Chr5:6300535-6301422 REVERSE LENGTH=295 | 201606
Length = 295
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%)
Query: 203 KLIWKKPTPPRVSFTVLAACIQKIPTIDQLKRRGFNLANRCIACRKEEETIDHIFIHCPV 262
K++W K PR S + ++++PT D+L+ G N+ + + C +ET H+F C
Sbjct: 129 KVVWFKEYIPRFSLITWMSFLERLPTRDRLRGWGMNIPSSWVLCSNGDETHAHLFFECSF 188
Query: 263 AENIWSFFSRTLRVS 277
+ IW FF+ R S
Sbjct: 189 SLAIWEFFASKFRPS 203
>AT1G43730.1 | RNA-directed DNA polymerase (reverse
transcriptase)-related family protein |
Chr1:16508723-16509784 REVERSE LENGTH=320 | 201606
Length = 320
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%)
Query: 202 HKLIWKKPTPPRVSFTVLAACIQKIPTIDQLKRRGFNLANRCIACRKEEETIDHIFIHCP 261
+K +W K P+ +F ++ T D+L+ G ++ C+ C +E+ H+F CP
Sbjct: 152 YKAVWFKNHVPKHAFICWVVAWNRLHTRDRLRSWGLSIPAVCLLCNSHDESRAHLFFECP 211
Query: 262 VAENIWSFFS 271
+W FF+
Sbjct: 212 FCGAVWRFFT 221
>AT3G25270.1 | Ribonuclease H-like superfamily protein |
Chr3:9203934-9204965 REVERSE LENGTH=343 | 201606
Length = 343
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 205 IWKKPTPPRVSFTVLAACIQKIPTIDQLKRRGFNLANRCIACRKEEETIDHIFIHCPVAE 264
IWK T P++ + + T D LKRR +C C +E+ET H+F C A+
Sbjct: 18 IWKLKTAPKIKHFLWKLLSGALATGDNLKRRHIRNHPQCHRCCQEDETSQHLFFDCFYAQ 77
Query: 265 NIWSFFSRTLRVSWCKLNTIGLTIE 289
+W R + +L T G+T+E
Sbjct: 78 QVW----RASGIPHQELRTTGITME 98