BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g0550.1
(397 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G36228.1 | nucleic acid binding / zinc ion binding protein | ... 66 1e-11
AT3G31430.1 | zinc knuckle (CCHC-type) family protein | Chr3:127... 62 2e-10
AT2G01050.1 | zinc ion binding / nucleic acid binding protein | ... 57 1e-08
AT5G18636.1 | Ta11-like non-LTR retrotransposon | Chr5:6211268-6... 55 4e-08
AT5G25200.1 | Ta11-like non-LTR retrotransposon | Chr5:8716766-8... 55 7e-08
>AT5G36228.1 | nucleic acid binding / zinc ion binding protein |
Chr5:14271691-14272776 FORWARD LENGTH=361 | 201606
Length = 361
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 5/153 (3%)
Query: 75 VKDNTFLIRFATASELDLAIDSAPWVIQEELVLIQKCREDLAPKDH-TFDTAWFWTQFHG 133
+ D F +RF + +L + APWV E + +Q+ ED +D TF W G
Sbjct: 73 LDDRCFQVRFRSEIDLLNGLRRAPWVFNEWFIALQRW-EDFPTEDFLTFIDVW--VHIRG 129
Query: 134 IPLSHLNSTIVNRLADTIENIVETT-KEEALKWSLFGRVKVEYNIHKSLQQSVYLRLSNH 192
IPL +++ V +A T+ +V EE F RVKV + + L+ +R ++
Sbjct: 130 IPLPYVSERTVEIIASTLGEVVAMDFNEETTSQITFIRVKVRMDFTEPLRFFRRVRFASR 189
Query: 193 KIILIDIRVEKLPHFCISCGLMGHTIKLCPIIL 225
+ +I EKL C +C + H + CP ++
Sbjct: 190 ERAMIGFEYEKLQRVCTNCCRVNHQVSHCPYVV 222
>AT3G31430.1 | zinc knuckle (CCHC-type) family protein |
Chr3:12795861-12796871 REVERSE LENGTH=336 | 201606
Length = 336
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 61/141 (43%), Gaps = 5/141 (3%)
Query: 84 FATASELDLAIDSAPWVIQEELVLIQKCREDLAPKDHTFDTAWFWTQFHGIPLSHLNSTI 143
F L+ + PW + ++L+Q+ P+ F FW Q GIP LN +
Sbjct: 177 FTLEESLETVLRRGPWAFNDWMILLQRWE----PQIPLFPFIPFWVQIRGIPFQFLNRGV 232
Query: 144 VNRLADTIENIVETT-KEEALKWSLFGRVKVEYNIHKSLQQSVYLRLSNHKIILIDIRVE 202
V + + +++T E + F RV + ++I L+ + + + L+ R E
Sbjct: 233 VEHIGRALGQVLDTDFNVEVVARMDFARVLLHWDITHPLRFQRHFQFTAGVNTLLRFRYE 292
Query: 203 KLPHFCISCGLMGHTIKLCPI 223
+L FC CG++ H C I
Sbjct: 293 RLRGFCEVCGMLTHDFGACLI 313
>AT2G01050.1 | zinc ion binding / nucleic acid binding protein |
Chr2:68337-69884 REVERSE LENGTH=515 | 201606
Length = 515
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 86/211 (40%), Gaps = 22/211 (10%)
Query: 26 DGDDVQPI------NLDLMKSGVIWIQCSKRVEIRQAMIRFS------KVLHGPNN-FTL 72
DG+D +P+ L+ M +W +C V++ + I S + L P+ T+
Sbjct: 55 DGEDEEPVITIGEEVLEAMNG--LWKKCMI-VKVLGSQIPISVLNRKLRELWKPSGVMTV 111
Query: 73 TEVKDNTFLIRFATASELDLAIDSAPWVIQEELVLIQKCREDLAPKDHTFDTAWFWTQFH 132
++ F+IRF E A+ PW + +L+Q P T W +
Sbjct: 112 MDLPRQFFMIRFELEEEYMAALTGGPWRVLGNYLLVQDWSSRFDPLRDDIVTTPVWVRLS 171
Query: 133 GIPLSHLNSTIVNRLADTIENIVETTKEEA-LKWSLFGRVKVEYNIHKSLQQSVYLRLSN 191
IP ++ + ++ +A + ++ F RV +E N+ K L+ +V +
Sbjct: 172 NIPYNYYHRCLLMEIARGLGRPLKVDMNTINFDKGRFARVCIEVNLAKPLKGTVLINGDR 231
Query: 192 HKIILIDIRVEKLPHFCISCGLMGHTIKLCP 222
+ + E L C SCG+ GH + CP
Sbjct: 232 YFVAY-----EGLSKICSSCGIYGHLVHSCP 257
>AT5G18636.1 | Ta11-like non-LTR retrotransposon |
Chr5:6211268-6212371 FORWARD LENGTH=367 | 201606
Length = 367
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 11/170 (6%)
Query: 61 SKVLHGPNNFTLT-----EVKDNTFLIRFATASELDLAI--DSAPWVIQEELVLIQKCRE 113
S V+ P ++ LT V D T+ ++F A+E+DL + PW+ V R
Sbjct: 53 SVVVALPRSWGLTTQVHGRVLDATY-VQFVFANEIDLMMVQRREPWLFNNWFV--AATRW 109
Query: 114 DLAPKDHTFDTAWFWTQFHGIPLSHLNSTIVNRLADTIENIVETTKEEALKWSL-FGRVK 172
+AP + T W Q GIPL +++ V +A + I+ EA + F RV+
Sbjct: 110 QVAPAHNLVTTIDLWVQIRGIPLPYVSEETVLEIAQDLGEIISLDFHEATSPQIAFIRVR 169
Query: 173 VEYNIHKSLQQSVYLRLSNHKIILIDIRVEKLPHFCISCGLMGHTIKLCP 222
V + I L+ + + + I + E+L C SC H CP
Sbjct: 170 VRFGITDRLRFFQRIIFDSGETATIRFQYERLRRLCSSCFRFTHNRAYCP 219
>AT5G25200.1 | Ta11-like non-LTR retrotransposon |
Chr5:8716766-8717869 REVERSE LENGTH=367 | 201606
Length = 367
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 11/170 (6%)
Query: 61 SKVLHGPNNFTLT-----EVKDNTFLIRFATASELDLAI--DSAPWVIQEELVLIQKCRE 113
S V+ P ++ LT V D T+ ++F A+E+DL + PW+ V R
Sbjct: 53 SVVVALPRSWGLTTQVHGRVLDATY-VQFLFANEIDLMMVQRREPWLFNNWFV--AATRW 109
Query: 114 DLAPKDHTFDTAWFWTQFHGIPLSHLNSTIVNRLADTIENIVETTKEEALKWSL-FGRVK 172
+AP + T W Q GIPL +++ V +A + I+ EA + F RV+
Sbjct: 110 QVAPAHNLVTTIDLWVQIRGIPLPYVSEETVLEIAQDLGEIISLDFHEATSPQIAFIRVR 169
Query: 173 VEYNIHKSLQQSVYLRLSNHKIILIDIRVEKLPHFCISCGLMGHTIKLCP 222
V + I L+ + + + I + E+L C SC H CP
Sbjct: 170 VRFGITDRLRFFQRIIFDSGETATIRFQYERLRRLCSSCFRFTHNRAYCP 219