BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g0580.1
(93 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 70 2e-16
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 67 3e-14
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 67 3e-14
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA
polymerase) | ChrM:228573-229085 REVERSE LENGTH=170 |
201606
Length = 170
Score = 70.5 bits (171), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 45/75 (60%)
Query: 19 LSREPTSYTEANKNAKWRDAMSAEFDVILLNQQWTLVPRYPSMNIVGNKWVYRIKSKSNG 78
+ +EP S A K+ W AM E D + N+ W LVP + NI+G KWV++ K S+G
Sbjct: 24 IKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDG 83
Query: 79 IIDRYKARLVVKGFS 93
+DR KARLV KGF
Sbjct: 84 TLDRLKARLVAKGFH 98
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 67.0 bits (162), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 20 SREPTSYTEANKNAKWRDAMSAEFDVILLNQQWTLVPRYPSMNIVGNKWVYRIKSKSNGI 79
++EP++Y EA + W AM E + W + P+ +G KWVY+IK S+G
Sbjct: 83 AKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGT 142
Query: 80 IDRYKARLVVKGFS 93
I+RYKARLV KG++
Sbjct: 143 IERYKARLVAKGYT 156
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 67.0 bits (162), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 20 SREPTSYTEANKNAKWRDAMSAEFDVILLNQQWTLVPRYPSMNIVGNKWVYRIKSKSNGI 79
++EP++Y EA + W AM E + W + P+ +G KWVY+IK S+G
Sbjct: 83 AKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGT 142
Query: 80 IDRYKARLVVKGFS 93
I+RYKARLV KG++
Sbjct: 143 IERYKARLVAKGYT 156