BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g0650.1
(353 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G19930.1 | F-box and associated interaction domains-containin... 54 7e-08
AT4G19940.1 | F-box and associated interaction domains-containin... 53 2e-07
AT5G22791.2 | F-box family protein | Chr5:7603579-7604771 REVERS... 52 3e-07
AT3G10240.1 | F-box and associated interaction domains-containin... 51 1e-06
AT1G70970.1 | F-box and associated interaction domains-containin... 50 2e-06
>AT4G19930.1 | F-box and associated interaction domains-containing
protein | Chr4:10803558-10804853 FORWARD LENGTH=431 |
201606
Length = 431
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 93/189 (49%), Gaps = 28/189 (14%)
Query: 28 LIFEVLTRLPVKTLLRFKTVCKKWCSLTQKDQNFIDSHLLNRSRLRRLFIANPVSTMDGY 87
L+ E+LTRLP K+L+RFK+V K W SL + F + L S ++RL++
Sbjct: 47 LVIEILTRLPAKSLMRFKSVSKLWSSLIC-SRTFTNRLLRVPSFIQRLYVT--------- 96
Query: 88 SDEMTYWENQYDNKCESYITADLILVKDDKGNISATNVVVVDTVREVESISYDIILNPVN 147
+T+ +N K + ++ +IS + VVD S+ + + +
Sbjct: 97 ---LTFLDNSLQRKSKLLSSS-----SSPGSDISTMSSFVVDRDLTTPSMKGYYLSHVLR 148
Query: 148 GLVCLSERDFQYGVRICNISTRELSQWFESSLLLDKKDCYRM-QDYHYAEHSYQLGFDPS 206
GL+C + + V+I N +TR+L +L D ++ + +D+ + Y++G DP
Sbjct: 149 GLMCFVK---EPSVKIYNTTTRQL------VVLPDIEESNIIAEDHKNKKIMYRIGHDPV 199
Query: 207 NNEHKLVCL 215
+++K+VC+
Sbjct: 200 GDQYKVVCI 208
>AT4G19940.1 | F-box and associated interaction domains-containing
protein | Chr4:10806195-10807430 FORWARD LENGTH=411 |
201606
Length = 411
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 88/189 (46%), Gaps = 31/189 (16%)
Query: 28 LIFEVLTRLPVKTLLRFKTVCKKWCSLTQKDQNFIDSHLLNRSRLRRLFIANPVSTMDGY 87
L+ E+LTRLP K+L+RFK+V K W SL +NF + LL S RLF+ S
Sbjct: 39 LVIEILTRLPAKSLMRFKSVSKLWSSLIC-SRNFTN-RLLKLSSPPRLFMCLSSS----- 91
Query: 88 SDEMTYWENQYDNKCESYITADLILVKDDKGNISATNVVVVDTVREVESISYDIILNPVN 147
DN + L D +S++ V+D + + I +
Sbjct: 92 -----------DNSHLKTVLLSLSSPPDSDITMSSS---VIDQDLTMPGMKGYQISHVFR 137
Query: 148 GLVCLSERDFQYGVRICNISTRELSQWFESSLLLDKKDCYRMQDYHYAEH-SYQLGFDPS 206
GL+CL ++ +I N +TR+L +L D ++ + + H ++ Y +G DP
Sbjct: 138 GLMCLVKKS---SAQIYNTTTRQL------VVLPDIEESTILAEEHKSKKIMYHIGHDPV 188
Query: 207 NNEHKLVCL 215
+++K+VC+
Sbjct: 189 YDQYKVVCI 197
>AT5G22791.2 | F-box family protein | Chr5:7603579-7604771 REVERSE
LENGTH=355 | 201606
Length = 355
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 29/145 (20%)
Query: 28 LIFEVLTRLPVKTLLRFKTVCKKWCSLTQKDQNFIDSHLLNRSRLR-RLFIANPVSTMDG 86
L E+++RLP K ++RF+ V K W S T + +NF DS L RS+ R RLF
Sbjct: 26 LTLEIVSRLPAKPIIRFQAVSKLWFS-TIRSKNFTDS-FLTRSKTRPRLF---------- 73
Query: 87 YSDEMTYWENQYDNKCESYITADLILVKDDKGNISATNVVVVDTVREVESISYDIILNPV 146
+ +D++ I ++ N ++ VV + ++Y I PV
Sbjct: 74 ------FTFKHFDSR------KRFIFSAPERDNNDKSSTVVARHDMTISDVAY-IRSLPV 120
Query: 147 NGLVCLSERDFQYGVRICNISTREL 171
NGL C + D + +CN +TR++
Sbjct: 121 NGLFCYTRGD---SIAVCNPTTRQI 142
>AT3G10240.1 | F-box and associated interaction domains-containing
protein | Chr3:3166698-3167867 FORWARD LENGTH=389 |
201606
Length = 389
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 100/226 (44%), Gaps = 54/226 (23%)
Query: 28 LIFEVLTRLPVKTLLRFKTVCKKWCSLTQKDQNFIDSHLLNRSRLRRLFIANP---VSTM 84
L+ E+L RLP K++ RF+ V K W S+T + FI+ RL F AN VS++
Sbjct: 31 LVSEILLRLPEKSVARFRCVSKPWSSITT-EPYFINLLTTRSPRLLLCFKANEKFFVSSI 89
Query: 85 DGYSDEMTYWENQYDNKCESYITADLILVKDDKGNISATNVVVVDTVREVESISYDIILN 144
+ W NK SY + LI D+ ++ + E ++Y
Sbjct: 90 PQHRQTFETW-----NKSHSY--SQLI----DRYHMEFS-----------EEMNYFPPTE 127
Query: 145 PVNGLVCLSERDFQYGVRIC--NISTRELSQWFESSLLLDKKDCYRMQDYHYAEHSYQLG 202
VNGL+C FQ R+ N STR+L L+L K + + + + LG
Sbjct: 128 SVNGLIC-----FQESARLIVWNPSTRQL-------LILPKPNG------NSNDLTIFLG 169
Query: 203 FDPSNNEHKLVCL-----WNVCLKL---RQVNIWFVSESYSTQRND 240
+DP +HK++C+ ++ C L +W ++++ R+D
Sbjct: 170 YDPVEGKHKVMCMEFSATYDTCRVLTLGSAQKLWRTVKTHNKHRSD 215
>AT1G70970.1 | F-box and associated interaction domains-containing
protein | Chr1:26759834-26761042 FORWARD LENGTH=402 |
201606
Length = 402
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 90/191 (47%), Gaps = 27/191 (14%)
Query: 31 EVLTRLPVKTLLRFKTVCKKWCSLTQKDQNFIDSHLLNRS--RLRRLFIANPVSTMDGYS 88
E+++ LP+K+LLRF V KKW S+ + +Q + L RS R R +F+ ++T+
Sbjct: 17 EIMSWLPLKSLLRFVIVSKKWASIIRGEQ--FKALYLRRSMTRPRLMFMVRRIATLPPEP 74
Query: 89 DEMTYWENQYDNKC-ESYITADLIL--VKDDKGNISATNVVVVDTVREVESISYDIILNP 145
+ + + + +C + + + V +K ++ +R + +Y + P
Sbjct: 75 EMVWFQSFCKEERCIPGQLEVEFLFHSVYQEKIPYFSSG---QQQLRVPPNTNYTSVSQP 131
Query: 146 VNGLVCL-SERDFQYGVRICNISTRELSQWFESSLLLDKKDCYRMQDYHYAEHSYQLGFD 204
+ GL+CL SE F +CN T+ +S L D +Q + A + LG+D
Sbjct: 132 IGGLICLQSETKFA----LCNPGTK------KSRALPD------IQAHEKAFITSFLGYD 175
Query: 205 PSNNEHKLVCL 215
+ N K++CL
Sbjct: 176 EATNVFKVLCL 186