BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g0670.1
(1198 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 240 6e-65
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 240 6e-65
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 143 5e-39
AT5G48050.1 | Copia-like polyprotein/retrotransposon | Chr5:1947... 91 9e-19
AT1G34070.1 | Copia-like polyprotein/retrotransposon | Chr1:1240... 86 8e-18
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 240 bits (612), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 119/303 (39%), Positives = 181/303 (59%), Gaps = 23/303 (7%)
Query: 903 LPASPIHTMTTRSKMGIHKPKYLPDFVSH---------------FSVCHPLPQAFVSLLD 947
+P +HT R++ KP YL D+ H + PL +F+ +
Sbjct: 26 VPEPSVHTSHRRTR----KPAYLQDYYCHSVASLTIHDISQFLSYEKVSPLYHSFLVCIA 81
Query: 948 IPPDPTTYKQASKSPAWCQAMQEEYEALQKNGTWSLVPSTPSMNILGCKWVYKTKLKSDG 1007
+P+TY +A + WC AM +E A++ TW + P+ +GCKWVYK K SDG
Sbjct: 82 KAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDG 141
Query: 1008 SIDRYKARLVAKGFHQLDGLDYSETFSPVVKSSTIRVVLTMAITNKWLIKQLDVSNAFLH 1067
+I+RYKARLVAKG+ Q +G+D+ ETFSPV K ++++++L ++ + + QLD+SNAFL+
Sbjct: 142 TIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLN 201
Query: 1068 GVLDEDVFMMQPPGFIDSENSSL----VCHLHKSLYGLKQAPRAWYTRFSDFLQEYGFLR 1123
G LDE+++M PPG+ + SL VC+L KS+YGLKQA R W+ +FS L +GF++
Sbjct: 202 GDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQ 261
Query: 1124 SSTDHFMFVYTMGLDTLVLLLYVDDIILTGSSSSVIQVLIDTLGFEFAMKDLGSLHYFLG 1183
S +DH F+ L +L+YVDDII+ ++ + + L L F ++DLG L YFLG
Sbjct: 262 SHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLG 321
Query: 1184 IEV 1186
+E+
Sbjct: 322 LEI 324
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 240 bits (612), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 119/303 (39%), Positives = 181/303 (59%), Gaps = 23/303 (7%)
Query: 903 LPASPIHTMTTRSKMGIHKPKYLPDFVSH---------------FSVCHPLPQAFVSLLD 947
+P +HT R++ KP YL D+ H + PL +F+ +
Sbjct: 26 VPEPSVHTSHRRTR----KPAYLQDYYCHSVASLTIHDISQFLSYEKVSPLYHSFLVCIA 81
Query: 948 IPPDPTTYKQASKSPAWCQAMQEEYEALQKNGTWSLVPSTPSMNILGCKWVYKTKLKSDG 1007
+P+TY +A + WC AM +E A++ TW + P+ +GCKWVYK K SDG
Sbjct: 82 KAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDG 141
Query: 1008 SIDRYKARLVAKGFHQLDGLDYSETFSPVVKSSTIRVVLTMAITNKWLIKQLDVSNAFLH 1067
+I+RYKARLVAKG+ Q +G+D+ ETFSPV K ++++++L ++ + + QLD+SNAFL+
Sbjct: 142 TIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLN 201
Query: 1068 GVLDEDVFMMQPPGFIDSENSSL----VCHLHKSLYGLKQAPRAWYTRFSDFLQEYGFLR 1123
G LDE+++M PPG+ + SL VC+L KS+YGLKQA R W+ +FS L +GF++
Sbjct: 202 GDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQ 261
Query: 1124 SSTDHFMFVYTMGLDTLVLLLYVDDIILTGSSSSVIQVLIDTLGFEFAMKDLGSLHYFLG 1183
S +DH F+ L +L+YVDDII+ ++ + + L L F ++DLG L YFLG
Sbjct: 262 SHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLG 321
Query: 1184 IEV 1186
+E+
Sbjct: 322 LEI 324
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase) |
ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 143 bits (361), Expect = 5e-39, Method: Composition-based stats.
Identities = 72/141 (51%), Positives = 91/141 (64%), Gaps = 18/141 (12%)
Query: 911 MTTRSKMGIHK--PKYLPDFVSHFSVCHPLPQAFVSLLDIPPDPTTYKQASKSPAWCQAM 968
M TRSK GI+K PKY + I +P + A K P WCQAM
Sbjct: 1 MLTRSKAGINKLNPKY----------------SLTITTTIKKEPKSVIFALKDPGWCQAM 44
Query: 969 QEEYEALQKNGTWSLVPSTPSMNILGCKWVYKTKLKSDGSIDRYKARLVAKGFHQLDGLD 1028
QEE +AL +N TW LVP + NILGCKWV+KTKL SDG++DR KARLVAKGFHQ +G+
Sbjct: 45 QEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIY 104
Query: 1029 YSETFSPVVKSSTIRVVLTMA 1049
+ ET+SPVV+++TIR +L +A
Sbjct: 105 FVETYSPVVRTATIRTILNVA 125
>AT5G48050.1 | Copia-like polyprotein/retrotransposon |
Chr5:19472661-19473770 REVERSE LENGTH=369 | 201606
Length = 369
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 115/232 (49%), Gaps = 26/232 (11%)
Query: 28 YISDKLDESNFLVWKDQFEAILISNDLYGFVDGSVTKPESSIIDSEGSSLPNP-DYINWR 86
+++ L++ N+ VW++ FE + +S + G +DGS T P P W+
Sbjct: 23 FVTLDLNKLNYDVWRELFETLCLSFGVLGHIDGSST--------------PTPMTEKRWK 68
Query: 87 KQDNFVKSCLKATFSKSISSDVLGLQ-TSREIWSYLETVYTEEFEAKQDLLRRQLQNTKR 145
++D VK + T + S+ ++ + T+R++W LE ++ + EA+ +L+ T
Sbjct: 69 ERDGLVKMWIYGTITDSLLDTIIKVGCTARDLWLSLENLFRDNKEARALQFENELRTTTI 128
Query: 146 GSASVSEYLRKLKSLADSLTAVRDRVSDREMIRIILSGLGKEFNQFIITINNRTDNITLP 205
SV EY +KLKSL+D LT V +SDR ++ +L+GL ++++ + I +++ +
Sbjct: 129 DDLSVHEYCQKLKSLSDLLTNVDSPISDRVLVMHLLNGLTEKYDYILNVIKHKSPFPSFT 188
Query: 206 ELRSKLLHHEQWLLSQDQD----------DQLAYYVKTSQNRKPNSYSNTNS 247
E RS LL E L ++ + + + V Q R P Y N NS
Sbjct: 189 EARSMLLMEESRLSNKSKSSLSHTNHPSLSNVLFTVPRQQERYPQEYHNNNS 240
>AT1G34070.1 | Copia-like polyprotein/retrotransposon |
Chr1:12402283-12403209 FORWARD LENGTH=308 | 201606
Length = 308
Score = 86.3 bits (212), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 18/179 (10%)
Query: 24 NITNYISDKLD--ESNFLVWKDQFEAILISNDLYGFVDGSVTKPESSIIDSEGSSLP-NP 80
NI ++I LD ESN+ W++ F +S D+ G +DG++ LP N
Sbjct: 15 NIKSHIPVMLDIEESNYDAWRELFLTHCLSFDVMGHIDGTL--------------LPTNA 60
Query: 81 DYINWRKQDNFVKSCLKATFS-KSISSDVLGLQTSREIWSYLETVYTEEFEAKQDLLRRQ 139
+ +NW+K+D VK L T + K + TSR+IW ++ + +A+ L +
Sbjct: 61 NDVNWQKRDGIVKLSLYGTLTPKQFQGSFVTSSTSRDIWLRIKNQFRNNKDARALRLDSE 120
Query: 140 LQNTKRGSASVSEYLRKLKSLADSLTAVRDRVSDREMIRIILSGLGKEFNQFIITINNR 198
L+ G V++Y RK+K LADSL V V+DR ++ +L+GL +F+ I I +R
Sbjct: 121 LRTKDIGDMRVADYYRKMKKLADSLRNVDVPVTDRNLVMYVLNGLNPKFDNIINVIKHR 179